Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VSX1Q9NZR4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VSX1Q9NZR4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VSX1Q9NZR4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VSX1Q9NZR4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 AC009299.2-201ENST00000482477 511 ntBASIC19.8■□□□□ 0.76
VSX1Q9NZR4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VSX1Q9NZR4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 AL451085.2-201ENST00000605085 799 ntBASIC19.79■□□□□ 0.76
VSX1Q9NZR4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VSX1Q9NZR4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VSX1Q9NZR4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.77■□□□□ 0.76
VSX1Q9NZR4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 AC010997.5-201ENST00000609182 354 ntBASIC19.77■□□□□ 0.76
VSX1Q9NZR4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VSX1Q9NZR4 AC127496.7-201ENST00000625110 1798 ntBASIC19.77■□□□□ 0.76
VSX1Q9NZR4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
VSX1Q9NZR4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VSX1Q9NZR4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 DUX4L4-201ENST00000566884 1269 ntBASIC19.76■□□□□ 0.75
VSX1Q9NZR4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 AC009102.2-201ENST00000606772 1639 ntBASIC19.76■□□□□ 0.75
VSX1Q9NZR4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VSX1Q9NZR4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.75■□□□□ 0.75
VSX1Q9NZR4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VSX1Q9NZR4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VSX1Q9NZR4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VSX1Q9NZR4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VSX1Q9NZR4 LINC00526-201ENST00000581067 1875 ntBASIC19.74■□□□□ 0.75
VSX1Q9NZR4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
VSX1Q9NZR4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VSX1Q9NZR4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms