Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
THUMPD1Q9NXG2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD1Q9NXG2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 AC144652.1-201ENST00000609974 1624 ntBASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.87■□□□□ 0.93
THUMPD1Q9NXG2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 AC005703.6-201ENST00000623265 1329 ntBASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
THUMPD1Q9NXG2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 AC137767.1-201ENST00000602918 1920 ntBASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 BX664725.1-201ENST00000438252 379 ntBASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 AC021242.3-201ENST00000607598 1377 ntBASIC20.85■□□□□ 0.93
THUMPD1Q9NXG2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.84■□□□□ 0.93
THUMPD1Q9NXG2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.83■□□□□ 0.93
THUMPD1Q9NXG2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
THUMPD1Q9NXG2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
THUMPD1Q9NXG2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
THUMPD1Q9NXG2 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.83■□□□□ 0.92
THUMPD1Q9NXG2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
THUMPD1Q9NXG2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
THUMPD1Q9NXG2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 FP325331.1-202ENST00000623531 1380 ntBASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
THUMPD1Q9NXG2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 AC242852.2-201ENST00000615738 1807 ntBASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
THUMPD1Q9NXG2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.8■□□□□ 0.92
THUMPD1Q9NXG2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms