Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SLC52A1Q9NWF4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC32.35■■■□□ 2.77
SLC52A1Q9NWF4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC32.35■■■□□ 2.77
SLC52A1Q9NWF4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC32.35■■■□□ 2.77
SLC52A1Q9NWF4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC32.35■■■□□ 2.77
SLC52A1Q9NWF4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC32.35■■■□□ 2.77
SLC52A1Q9NWF4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC32.34■■■□□ 2.77
SLC52A1Q9NWF4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SLC52A1Q9NWF4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC32.33■■■□□ 2.77
SLC52A1Q9NWF4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC32.33■■■□□ 2.77
SLC52A1Q9NWF4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.77
SLC52A1Q9NWF4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SLC52A1Q9NWF4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC32.32■■■□□ 2.76
SLC52A1Q9NWF4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SLC52A1Q9NWF4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC32.32■■■□□ 2.76
SLC52A1Q9NWF4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.32■■■□□ 2.76
SLC52A1Q9NWF4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 GAS2L1P2-201ENST00000436355 1356 ntBASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SLC52A1Q9NWF4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SLC52A1Q9NWF4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
SLC52A1Q9NWF4 CDCA4P2-201ENST00000441182 718 ntBASIC32.3■■■□□ 2.76
SLC52A1Q9NWF4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC32.3■■■□□ 2.76
SLC52A1Q9NWF4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SLC52A1Q9NWF4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SLC52A1Q9NWF4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 AC022211.4-201ENST00000625094 2161 ntBASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 AC135731.1-201ENST00000569415 2548 ntBASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC32.28■■■□□ 2.76
SLC52A1Q9NWF4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SLC52A1Q9NWF4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC32.26■■■□□ 2.76
SLC52A1Q9NWF4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.26■■■□□ 2.76
SLC52A1Q9NWF4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SLC52A1Q9NWF4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
SLC52A1Q9NWF4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
SLC52A1Q9NWF4 AC073111.5-205ENST00000641717 521 ntBASIC32.26■■■□□ 2.75
SLC52A1Q9NWF4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
SLC52A1Q9NWF4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
SLC52A1Q9NWF4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC32.26■■■□□ 2.75
SLC52A1Q9NWF4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 AC137761.2-201ENST00000561729 223 ntBASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 AC145350.3-201ENST00000569033 163 ntBASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SLC52A1Q9NWF4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 AP004607.4-201ENST00000530158 1459 ntBASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SLC52A1Q9NWF4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SLC52A1Q9NWF4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SLC52A1Q9NWF4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC32.23■■■□□ 2.75
SLC52A1Q9NWF4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC32.23■■■□□ 2.75
SLC52A1Q9NWF4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
SLC52A1Q9NWF4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms