Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.34■□□□□ 0.85
SDHAF3Q9NRP4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 AL499627.2-201ENST00000606283 725 ntBASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SDHAF3Q9NRP4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.33■□□□□ 0.84
SDHAF3Q9NRP4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDHAF3Q9NRP4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SDHAF3Q9NRP4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 UNC93B3-201ENST00000308076 687 ntBASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 AC006455.2-201ENST00000429931 906 ntBASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 MIR3181-201ENST00000578512 73 ntBASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SDHAF3Q9NRP4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 AC096631.2-201ENST00000436136 790 ntBASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SDHAF3Q9NRP4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 AC011298.3-201ENST00000615796 283 ntBASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SDHAF3Q9NRP4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 AL136162.1-201ENST00000607711 1078 ntBASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 DUSP8P3-201ENST00000399571 1760 ntBASIC20.29■□□□□ 0.84
SDHAF3Q9NRP4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SDHAF3Q9NRP4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms