Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHL1Q9NR64 SERBP1P1-201ENST00000396021 1160 ntBASIC20.78■□□□□ 0.92
KLHL1Q9NR64 SUDS3P1-201ENST00000505831 966 ntBASIC20.78■□□□□ 0.92
KLHL1Q9NR64 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KLHL1Q9NR64 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.77■□□□□ 0.92
KLHL1Q9NR64 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHL1Q9NR64 AL161729.1-201ENST00000604104 1402 ntBASIC20.77■□□□□ 0.91
KLHL1Q9NR64 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 AF213884.3-201ENST00000563833 479 ntBASIC20.76■□□□□ 0.91
KLHL1Q9NR64 MIR4767-201ENST00000582827 78 ntBASIC20.76■□□□□ 0.91
KLHL1Q9NR64 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 C17orf82-201ENST00000623772 1530 ntBASIC20.76■□□□□ 0.91
KLHL1Q9NR64 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHL1Q9NR64 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KLHL1Q9NR64 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 ALDH1A3-203ENST00000557963 1670 ntBASIC20.74■□□□□ 0.91
KLHL1Q9NR64 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.74■□□□□ 0.91
KLHL1Q9NR64 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KLHL1Q9NR64 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL1Q9NR64 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL1Q9NR64 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL1Q9NR64 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.72■□□□□ 0.91
KLHL1Q9NR64 AL136967.2-201ENST00000623968 743 ntBASIC20.72■□□□□ 0.91
KLHL1Q9NR64 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL1Q9NR64 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHL1Q9NR64 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHL1Q9NR64 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
KLHL1Q9NR64 AC006455.2-201ENST00000429931 906 ntBASIC20.71■□□□□ 0.91
KLHL1Q9NR64 AC105265.2-201ENST00000467189 838 ntBASIC20.71■□□□□ 0.91
KLHL1Q9NR64 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.71■□□□□ 0.91
KLHL1Q9NR64 AP001330.3-201ENST00000520123 633 ntBASIC20.71■□□□□ 0.91
KLHL1Q9NR64 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.71■□□□□ 0.91
KLHL1Q9NR64 AC241377.3-202ENST00000626088 1088 ntBASIC20.71■□□□□ 0.91
KLHL1Q9NR64 AC241585.3-202ENST00000628937 1088 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms