Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 AL137060.1-201ENST00000618151 2648 ntBASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC52A3Q9NQ40 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A3Q9NQ40 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.15■□□□□ 0.98
SLC52A3Q9NQ40 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC52A3Q9NQ40 AC074183.2-201ENST00000623112 922 ntBASIC21.15■□□□□ 0.98
SLC52A3Q9NQ40 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A3Q9NQ40 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC52A3Q9NQ40 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
SLC52A3Q9NQ40 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC52A3Q9NQ40 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.14■□□□□ 0.98
SLC52A3Q9NQ40 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.14■□□□□ 0.98
SLC52A3Q9NQ40 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC52A3Q9NQ40 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC52A3Q9NQ40 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SLC52A3Q9NQ40 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC52A3Q9NQ40 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC52A3Q9NQ40 AC004987.1-201ENST00000428627 508 ntBASIC21.14■□□□□ 0.97
SLC52A3Q9NQ40 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC52A3Q9NQ40 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 FBXW4P1-201ENST00000426721 2239 ntBASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 SNX5-217ENST00000606557 1087 ntBASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC52A3Q9NQ40 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 ATP5G2P3-201ENST00000429083 425 ntBASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 ABHD17AP5-201ENST00000580133 923 ntBASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC52A3Q9NQ40 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC52A3Q9NQ40 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC52A3Q9NQ40 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 AC010980.1-201ENST00000587192 1142 ntBASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 BHLHE23-202ENST00000612929 1109 ntBASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC52A3Q9NQ40 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms