Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF556Q9HAH1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF556Q9HAH1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF556Q9HAH1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF556Q9HAH1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 AC092053.2-201ENST00000640557 1818 ntBASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF556Q9HAH1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 AC007375.3-201ENST00000600936 2314 ntBASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
ZNF556Q9HAH1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 AC022616.5-201ENST00000518796 181 ntBASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF556Q9HAH1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ZNF556Q9HAH1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 C11orf96-202ENST00000528572 1834 ntBASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF556Q9HAH1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms