Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
POLR1BQ9H9Y6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 AC233992.3-201ENST00000607491 485 ntBASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
POLR1BQ9H9Y6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 C17orf82-201ENST00000623772 1530 ntBASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.79■■□□□ 1.08
POLR1BQ9H9Y6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.78■■□□□ 1.08
POLR1BQ9H9Y6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 BX842568.3-201ENST00000418104 571 ntBASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
POLR1BQ9H9Y6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 AC034268.1-201ENST00000441047 882 ntBASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR1BQ9H9Y6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 C9orf163-202ENST00000624034 2573 ntBASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
POLR1BQ9H9Y6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 RARRES2P11-201ENST00000635158 484 ntBASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR1BQ9H9Y6 AL022069.1-201ENST00000568025 1636 ntBASIC21.73■■□□□ 1.07
POLR1BQ9H9Y6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms