Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.21■■□□□ 1.63
TMEM60Q9H2L4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TMEM60Q9H2L4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.21■■□□□ 1.63
TMEM60Q9H2L4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMEM60Q9H2L4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.2■■□□□ 1.63
TMEM60Q9H2L4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
TMEM60Q9H2L4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 AL136116.3-201ENST00000402907 1138 ntBASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
TMEM60Q9H2L4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 AC009086.3-201ENST00000623486 1008 ntBASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 AC241377.3-202ENST00000626088 1088 ntBASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 AC241585.3-202ENST00000628937 1088 ntBASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 AC245100.8-202ENST00000629247 1058 ntBASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
TMEM60Q9H2L4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
TMEM60Q9H2L4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 C1orf229-201ENST00000623686 2258 ntBASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.17■■□□□ 1.62
TMEM60Q9H2L4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.16■■□□□ 1.62
TMEM60Q9H2L4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 AL499627.2-201ENST00000606283 725 ntBASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TMEM60Q9H2L4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 pRNA.6-201ENST00000610482 90 ntBASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 pRNA.5-201ENST00000612139 90 ntBASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 pRNA.11-201ENST00000618423 90 ntBASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 pRNA.13-201ENST00000619112 90 ntBASIC25.14■■□□□ 1.62
TMEM60Q9H2L4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TMEM60Q9H2L4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
TMEM60Q9H2L4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.14■■□□□ 1.61
TMEM60Q9H2L4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 MIR3181-201ENST00000578512 73 ntBASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
TMEM60Q9H2L4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TMEM60Q9H2L4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TMEM60Q9H2L4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms