Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 AC004448.1-201ENST00000458332 883 ntBASIC13.11□□□□□ -0.31
LIMD2Q9BT23 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIMD2Q9BT23 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 AC103724.3-201ENST00000564481 992 ntBASIC13.1□□□□□ -0.31
LIMD2Q9BT23 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 EFS-203ENST00000429593 2610 ntTSL 2 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC13.1□□□□□ -0.31
LIMD2Q9BT23 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 AF131216.4-201ENST00000638924 1588 ntBASIC13.09□□□□□ -0.31
LIMD2Q9BT23 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LIMD2Q9BT23 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LIMD2Q9BT23 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 KRT125P-201ENST00000546827 989 ntBASIC13.08□□□□□ -0.32
LIMD2Q9BT23 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 AC137630.3-201ENST00000607245 391 ntBASIC13.08□□□□□ -0.32
LIMD2Q9BT23 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LIMD2Q9BT23 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LIMD2Q9BT23 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms