Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VRK1Q99986 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
VRK1Q99986 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 LINC00565-201ENST00000562710 2331 ntBASIC19.44■□□□□ 0.7
VRK1Q99986 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.44■□□□□ 0.7
VRK1Q99986 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
VRK1Q99986 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VRK1Q99986 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.44■□□□□ 0.7
VRK1Q99986 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.43■□□□□ 0.7
VRK1Q99986 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 UNC93B3-201ENST00000308076 687 ntBASIC19.43■□□□□ 0.7
VRK1Q99986 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.43■□□□□ 0.7
VRK1Q99986 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.43■□□□□ 0.7
VRK1Q99986 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VRK1Q99986 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.43■□□□□ 0.7
VRK1Q99986 ABCB10P4-201ENST00000566803 2184 ntBASIC19.43■□□□□ 0.7
VRK1Q99986 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VRK1Q99986 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VRK1Q99986 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VRK1Q99986 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.42■□□□□ 0.7
VRK1Q99986 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VRK1Q99986 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VRK1Q99986 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VRK1Q99986 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.42■□□□□ 0.7
VRK1Q99986 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.42■□□□□ 0.7
VRK1Q99986 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
VRK1Q99986 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VRK1Q99986 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VRK1Q99986 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VRK1Q99986 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
VRK1Q99986 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.41■□□□□ 0.7
VRK1Q99986 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK1Q99986 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.41■□□□□ 0.7
VRK1Q99986 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK1Q99986 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.41■□□□□ 0.7
VRK1Q99986 AC005837.3-201ENST00000612163 286 ntBASIC19.41■□□□□ 0.7
VRK1Q99986 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.41■□□□□ 0.7
VRK1Q99986 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VRK1Q99986 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VRK1Q99986 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VRK1Q99986 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VRK1Q99986 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VRK1Q99986 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
VRK1Q99986 AC004812.2-201ENST00000611079 2094 ntBASIC19.4■□□□□ 0.7
VRK1Q99986 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK1Q99986 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.4■□□□□ 0.7
VRK1Q99986 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK1Q99986 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK1Q99986 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK1Q99986 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VRK1Q99986 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.4■□□□□ 0.7
VRK1Q99986 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.4■□□□□ 0.7
VRK1Q99986 AL136162.1-201ENST00000607711 1078 ntBASIC19.4■□□□□ 0.7
VRK1Q99986 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK1Q99986 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VRK1Q99986 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
VRK1Q99986 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
VRK1Q99986 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.7
VRK1Q99986 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VRK1Q99986 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.39■□□□□ 0.7
VRK1Q99986 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VRK1Q99986 EP400NL-214ENST00000641289 2402 ntBASIC19.39■□□□□ 0.69
VRK1Q99986 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK1Q99986 MIR935-201ENST00000401179 91 ntBASIC19.39■□□□□ 0.69
VRK1Q99986 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.39■□□□□ 0.69
VRK1Q99986 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.39■□□□□ 0.69
VRK1Q99986 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.39■□□□□ 0.69
VRK1Q99986 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.39■□□□□ 0.69
VRK1Q99986 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK1Q99986 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
VRK1Q99986 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK1Q99986 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.39■□□□□ 0.69
VRK1Q99986 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.39■□□□□ 0.69
VRK1Q99986 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VRK1Q99986 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VRK1Q99986 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.39■□□□□ 0.69
VRK1Q99986 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms