Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.21■□□□□ 0.18
MUC4Q99102 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
MUC4Q99102 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.2■□□□□ 0.18
MUC4Q99102 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 AC127496.7-201ENST00000625110 1798 ntBASIC16.2■□□□□ 0.18
MUC4Q99102 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.2■□□□□ 0.18
MUC4Q99102 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
MUC4Q99102 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.2■□□□□ 0.18
MUC4Q99102 AC139530.1-201ENST00000575312 1977 ntBASIC16.2■□□□□ 0.18
MUC4Q99102 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.2■□□□□ 0.18
MUC4Q99102 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MUC4Q99102 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MUC4Q99102 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MUC4Q99102 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
MUC4Q99102 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MUC4Q99102 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MUC4Q99102 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.2■□□□□ 0.18
MUC4Q99102 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.2■□□□□ 0.18
MUC4Q99102 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MUC4Q99102 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MUC4Q99102 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
MUC4Q99102 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MUC4Q99102 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.19■□□□□ 0.18
MUC4Q99102 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MUC4Q99102 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MUC4Q99102 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MUC4Q99102 KRT125P-201ENST00000546827 989 ntBASIC16.19■□□□□ 0.18
MUC4Q99102 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.19■□□□□ 0.18
MUC4Q99102 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.18■□□□□ 0.18
MUC4Q99102 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.18■□□□□ 0.18
MUC4Q99102 ECEL1P1-201ENST00000373592 1742 ntBASIC16.18■□□□□ 0.18
MUC4Q99102 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.18■□□□□ 0.18
MUC4Q99102 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MUC4Q99102 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.18■□□□□ 0.18
MUC4Q99102 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.18■□□□□ 0.18
MUC4Q99102 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MUC4Q99102 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.17■□□□□ 0.18
MUC4Q99102 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.17■□□□□ 0.18
MUC4Q99102 AC242852.2-201ENST00000615738 1807 ntBASIC16.17■□□□□ 0.18
MUC4Q99102 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MUC4Q99102 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.17■□□□□ 0.18
MUC4Q99102 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.17■□□□□ 0.18
MUC4Q99102 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.17■□□□□ 0.18
MUC4Q99102 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.17■□□□□ 0.18
MUC4Q99102 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MUC4Q99102 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 AC021242.3-201ENST00000607598 1377 ntBASIC16.17■□□□□ 0.18
MUC4Q99102 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.17■□□□□ 0.18
MUC4Q99102 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MUC4Q99102 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.16■□□□□ 0.18
MUC4Q99102 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MUC4Q99102 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.16■□□□□ 0.18
MUC4Q99102 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.16■□□□□ 0.18
MUC4Q99102 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.16■□□□□ 0.18
MUC4Q99102 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.16■□□□□ 0.18
MUC4Q99102 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.16■□□□□ 0.18
MUC4Q99102 MIR4787-201ENST00000607364 84 ntBASIC16.16■□□□□ 0.18
MUC4Q99102 AL353803.4-201ENST00000565882 1934 ntBASIC16.16■□□□□ 0.18
MUC4Q99102 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
MUC4Q99102 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MUC4Q99102 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MUC4Q99102 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
MUC4Q99102 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MUC4Q99102 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MUC4Q99102 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
MUC4Q99102 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms