Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC46A1Q96NT5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC46A1Q96NT5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC46A1Q96NT5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC46A1Q96NT5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC46A1Q96NT5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.33■■□□□ 1
SLC46A1Q96NT5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SLC46A1Q96NT5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
SLC46A1Q96NT5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SLC46A1Q96NT5 KRT18P14-201ENST00000534205 1250 ntBASIC21.32■■□□□ 1
SLC46A1Q96NT5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC46A1Q96NT5 AC133637.1-201ENST00000624115 1537 ntBASIC21.32■■□□□ 1
SLC46A1Q96NT5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.32■■□□□ 1
SLC46A1Q96NT5 LINC02228-203ENST00000641970 1355 ntBASIC21.32■■□□□ 1
SLC46A1Q96NT5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.32■■□□□ 1
SLC46A1Q96NT5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC46A1Q96NT5 TERF1P2-201ENST00000583350 1212 ntBASIC21.31■■□□□ 1
SLC46A1Q96NT5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
SLC46A1Q96NT5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
SLC46A1Q96NT5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.3■■□□□ 1
SLC46A1Q96NT5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.3■■□□□ 1
SLC46A1Q96NT5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC46A1Q96NT5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.3■■□□□ 1
SLC46A1Q96NT5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.3■■□□□ 1
SLC46A1Q96NT5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.3■■□□□ 1
SLC46A1Q96NT5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC46A1Q96NT5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC46A1Q96NT5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC46A1Q96NT5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC46A1Q96NT5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC46A1Q96NT5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC46A1Q96NT5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SLC46A1Q96NT5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC46A1Q96NT5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 AL499627.2-201ENST00000606283 725 ntBASIC21.28■■□□□ 1
SLC46A1Q96NT5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC46A1Q96NT5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SLC46A1Q96NT5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.28■■□□□ 1
SLC46A1Q96NT5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC46A1Q96NT5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC46A1Q96NT5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SLC46A1Q96NT5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC46A1Q96NT5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC46A1Q96NT5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC46A1Q96NT5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms