Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.83■■□□□ 1.41
ZNF560Q96MR9 OR2I1P-207ENST00000453522 948 ntBASIC23.83■■□□□ 1.41
ZNF560Q96MR9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZNF560Q96MR9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZNF560Q96MR9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
ZNF560Q96MR9 AC099791.1-201ENST00000416440 715 ntBASIC23.82■■□□□ 1.4
ZNF560Q96MR9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 SLC47A1P1-202ENST00000449666 945 ntBASIC23.82■■□□□ 1.4
ZNF560Q96MR9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF560Q96MR9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 CA15P2-201ENST00000611168 834 ntBASIC23.81■■□□□ 1.4
ZNF560Q96MR9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF560Q96MR9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF560Q96MR9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF560Q96MR9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ZNF560Q96MR9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF560Q96MR9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF560Q96MR9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.79■■□□□ 1.4
ZNF560Q96MR9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF560Q96MR9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF560Q96MR9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 AC105265.2-201ENST00000467189 838 ntBASIC23.77■■□□□ 1.4
ZNF560Q96MR9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZNF560Q96MR9 AC004687.1-201ENST00000579003 1625 ntBASIC23.77■■□□□ 1.4
ZNF560Q96MR9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 AC126544.1-201ENST00000580842 1059 ntBASIC23.76■■□□□ 1.39
ZNF560Q96MR9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZNF560Q96MR9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.75■■□□□ 1.39
ZNF560Q96MR9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ZNF560Q96MR9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 AC010525.1-201ENST00000585559 441 ntBASIC23.74■■□□□ 1.39
ZNF560Q96MR9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
ZNF560Q96MR9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF560Q96MR9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF560Q96MR9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF560Q96MR9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms