Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 AC079834.2-201ENST00000609776 1949 ntBASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.77■■□□□ 1.08
PDLIM5Q96HC4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.77■■□□□ 1.07
PDLIM5Q96HC4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 AC127496.7-201ENST00000625110 1798 ntBASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PDLIM5Q96HC4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 AL117332.1-201ENST00000622628 974 ntBASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PDLIM5Q96HC4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PDLIM5Q96HC4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 MIR3621-201ENST00000580529 85 ntBASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 GUSBP5-202ENST00000510805 1989 ntBASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.73■■□□□ 1.07
PDLIM5Q96HC4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 AL356740.2-201ENST00000601559 647 ntBASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDLIM5Q96HC4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 AL499627.2-201ENST00000606283 725 ntBASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 AC241377.3-202ENST00000626088 1088 ntBASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 AC241585.3-202ENST00000628937 1088 ntBASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 AC245100.8-202ENST00000629247 1058 ntBASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 ECEL1P1-201ENST00000373592 1742 ntBASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM5Q96HC4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM5Q96HC4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms