Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RNF31Q96EP0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RNF31Q96EP0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF31Q96EP0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF31Q96EP0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 AC126544.1-201ENST00000580842 1059 ntBASIC21.34■■□□□ 1.01
RNF31Q96EP0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF31Q96EP0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF31Q96EP0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF31Q96EP0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF31Q96EP0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF31Q96EP0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF31Q96EP0 ABCB10P4-201ENST00000566803 2184 ntBASIC21.33■■□□□ 1.01
RNF31Q96EP0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RNF31Q96EP0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF31Q96EP0 IRS3P-201ENST00000223076 1006 ntBASIC21.33■■□□□ 1.01
RNF31Q96EP0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF31Q96EP0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF31Q96EP0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF31Q96EP0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF31Q96EP0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF31Q96EP0 AC010525.1-201ENST00000585559 441 ntBASIC21.33■■□□□ 1.01
RNF31Q96EP0 AL138724.1-201ENST00000606771 1088 ntBASIC21.33■■□□□ 1.01
RNF31Q96EP0 AC233992.3-201ENST00000607491 485 ntBASIC21.33■■□□□ 1.01
RNF31Q96EP0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.33■■□□□ 1
RNF31Q96EP0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.33■■□□□ 1
RNF31Q96EP0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.33■■□□□ 1
RNF31Q96EP0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF31Q96EP0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RNF31Q96EP0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.32■■□□□ 1
RNF31Q96EP0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
RNF31Q96EP0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.32■■□□□ 1
RNF31Q96EP0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RNF31Q96EP0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.32■■□□□ 1
RNF31Q96EP0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.32■■□□□ 1
RNF31Q96EP0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.32■■□□□ 1
RNF31Q96EP0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.32■■□□□ 1
RNF31Q96EP0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF31Q96EP0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.32■■□□□ 1
RNF31Q96EP0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF31Q96EP0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF31Q96EP0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF31Q96EP0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.31■■□□□ 1
RNF31Q96EP0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF31Q96EP0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF31Q96EP0 TSPY26P-201ENST00000476365 1326 ntBASIC21.3■■□□□ 1
RNF31Q96EP0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.3■■□□□ 1
RNF31Q96EP0 AC004812.2-201ENST00000611079 2094 ntBASIC21.3■■□□□ 1
RNF31Q96EP0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF31Q96EP0 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.3■■□□□ 1
RNF31Q96EP0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.3■■□□□ 1
RNF31Q96EP0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RNF31Q96EP0 AL161729.1-201ENST00000604104 1402 ntBASIC21.29■■□□□ 1
RNF31Q96EP0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF31Q96EP0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.29■■□□□ 1
RNF31Q96EP0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.29■■□□□ 1
RNF31Q96EP0 MIR6084-201ENST00000622012 110 ntBASIC21.29■■□□□ 1
RNF31Q96EP0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.29■■□□□ 1
RNF31Q96EP0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF31Q96EP0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF31Q96EP0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.28■■□□□ 1
RNF31Q96EP0 BX842568.3-201ENST00000418104 571 ntBASIC21.28■■□□□ 1
RNF31Q96EP0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.28■■□□□ 1
RNF31Q96EP0 AL162430.1-201ENST00000480705 870 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms