Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEH1LQ96EE3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEH1LQ96EE3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEH1LQ96EE3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEH1LQ96EE3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
SEH1LQ96EE3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 KRT125P-201ENST00000546827 989 ntBASIC19.26■□□□□ 0.67
SEH1LQ96EE3 SNX5-217ENST00000606557 1087 ntBASIC19.26■□□□□ 0.67
SEH1LQ96EE3 MIR4787-201ENST00000607364 84 ntBASIC19.26■□□□□ 0.67
SEH1LQ96EE3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SEH1LQ96EE3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 AC004448.1-201ENST00000458332 883 ntBASIC19.25■□□□□ 0.67
SEH1LQ96EE3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 AC242852.2-201ENST00000615738 1807 ntBASIC19.25■□□□□ 0.67
SEH1LQ96EE3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEH1LQ96EE3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 Z92544.1-202ENST00000571933 1220 ntBASIC19.24■□□□□ 0.67
SEH1LQ96EE3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEH1LQ96EE3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.23■□□□□ 0.67
SEH1LQ96EE3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEH1LQ96EE3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.22■□□□□ 0.67
SEH1LQ96EE3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 TSPY9P-201ENST00000440215 945 ntBASIC19.22■□□□□ 0.67
SEH1LQ96EE3 TSPY11P-201ENST00000442607 1045 ntBASIC19.22■□□□□ 0.67
SEH1LQ96EE3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 AC092028.1-203ENST00000608262 953 ntBASIC19.22■□□□□ 0.67
SEH1LQ96EE3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.22■□□□□ 0.67
SEH1LQ96EE3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms