Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPTSSAQ969W0 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.43■□□□□ 0.7
SPTSSAQ969W0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.43■□□□□ 0.7
SPTSSAQ969W0 MIR6724-1-201ENST00000616420 92 ntBASIC19.43■□□□□ 0.7
SPTSSAQ969W0 MIR6724-2-201ENST00000616483 92 ntBASIC19.43■□□□□ 0.7
SPTSSAQ969W0 MIR6724-4-201ENST00000617390 92 ntBASIC19.43■□□□□ 0.7
SPTSSAQ969W0 MIR6724-3-201ENST00000622482 92 ntBASIC19.43■□□□□ 0.7
SPTSSAQ969W0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTSSAQ969W0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPTSSAQ969W0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPTSSAQ969W0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPTSSAQ969W0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTSSAQ969W0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPTSSAQ969W0 AC009102.2-201ENST00000606772 1639 ntBASIC19.41■□□□□ 0.7
SPTSSAQ969W0 UNC93B8-201ENST00000511903 705 ntBASIC19.41■□□□□ 0.7
SPTSSAQ969W0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.41■□□□□ 0.7
SPTSSAQ969W0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.41■□□□□ 0.7
SPTSSAQ969W0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.41■□□□□ 0.7
SPTSSAQ969W0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPTSSAQ969W0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 AC233723.2-201ENST00000623798 2106 ntBASIC19.4■□□□□ 0.7
SPTSSAQ969W0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 KRT16P3-201ENST00000439127 1283 ntBASIC19.4■□□□□ 0.7
SPTSSAQ969W0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
SPTSSAQ969W0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.39■□□□□ 0.7
SPTSSAQ969W0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPTSSAQ969W0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPTSSAQ969W0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SPTSSAQ969W0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPTSSAQ969W0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPTSSAQ969W0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 DUX4L4-201ENST00000566884 1269 ntBASIC19.38■□□□□ 0.69
SPTSSAQ969W0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 AC009086.3-201ENST00000623486 1008 ntBASIC19.38■□□□□ 0.69
SPTSSAQ969W0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SPTSSAQ969W0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 ESRRAP2-201ENST00000418437 1549 ntBASIC19.37■□□□□ 0.69
SPTSSAQ969W0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPTSSAQ969W0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPTSSAQ969W0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTSSAQ969W0 AL117328.2-201ENST00000624617 1940 ntBASIC19.35■□□□□ 0.69
SPTSSAQ969W0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTSSAQ969W0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.35■□□□□ 0.69
SPTSSAQ969W0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.35■□□□□ 0.69
SPTSSAQ969W0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SPTSSAQ969W0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPTSSAQ969W0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms