Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 POU5F1P3-201ENST00000428824 1078 ntBASIC19.68■□□□□ 0.74
USP9XQ93008 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.68■□□□□ 0.74
USP9XQ93008 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP9XQ93008 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
USP9XQ93008 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP9XQ93008 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP9XQ93008 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.67■□□□□ 0.74
USP9XQ93008 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.67■□□□□ 0.74
USP9XQ93008 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.67■□□□□ 0.74
USP9XQ93008 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP9XQ93008 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP9XQ93008 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP9XQ93008 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.67■□□□□ 0.74
USP9XQ93008 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP9XQ93008 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.67■□□□□ 0.74
USP9XQ93008 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP9XQ93008 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.67■□□□□ 0.74
USP9XQ93008 AC105233.4-201ENST00000642045 216 ntBASIC19.67■□□□□ 0.74
USP9XQ93008 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP9XQ93008 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP9XQ93008 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.66■□□□□ 0.74
USP9XQ93008 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.66■□□□□ 0.74
USP9XQ93008 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
USP9XQ93008 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP9XQ93008 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP9XQ93008 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP9XQ93008 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.66■□□□□ 0.74
USP9XQ93008 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP9XQ93008 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.66■□□□□ 0.74
USP9XQ93008 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
USP9XQ93008 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP9XQ93008 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP9XQ93008 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP9XQ93008 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 MIR1224-201ENST00000408193 85 ntBASIC19.65■□□□□ 0.74
USP9XQ93008 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.65■□□□□ 0.74
USP9XQ93008 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
USP9XQ93008 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP9XQ93008 ITM2C-210ENST00000620962 501 ntBASIC19.65■□□□□ 0.74
USP9XQ93008 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP9XQ93008 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP9XQ93008 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP9XQ93008 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP9XQ93008 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP9XQ93008 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP9XQ93008 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP9XQ93008 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP9XQ93008 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.64■□□□□ 0.73
USP9XQ93008 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP9XQ93008 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
USP9XQ93008 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.63■□□□□ 0.73
USP9XQ93008 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.63■□□□□ 0.73
USP9XQ93008 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.63■□□□□ 0.73
USP9XQ93008 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP9XQ93008 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.63■□□□□ 0.73
USP9XQ93008 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.63■□□□□ 0.73
USP9XQ93008 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP9XQ93008 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP9XQ93008 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP9XQ93008 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP9XQ93008 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP9XQ93008 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP9XQ93008 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.63■□□□□ 0.73
USP9XQ93008 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP9XQ93008 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP9XQ93008 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.62■□□□□ 0.73
USP9XQ93008 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP9XQ93008 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP9XQ93008 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
USP9XQ93008 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.62■□□□□ 0.73
USP9XQ93008 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP9XQ93008 DUX4L16-201ENST00000555130 1264 ntBASIC19.62■□□□□ 0.73
USP9XQ93008 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.62■□□□□ 0.73
USP9XQ93008 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP9XQ93008 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP9XQ93008 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP9XQ93008 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP9XQ93008 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.61■□□□□ 0.73
USP9XQ93008 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP9XQ93008 AC098590.1-201ENST00000468126 897 ntBASIC19.61■□□□□ 0.73
USP9XQ93008 AC005181.1-201ENST00000604782 1256 ntBASIC19.61■□□□□ 0.73
USP9XQ93008 BX005040.4-201ENST00000637145 1518 ntBASIC19.61■□□□□ 0.73
USP9XQ93008 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.61■□□□□ 0.73
USP9XQ93008 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
USP9XQ93008 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP9XQ93008 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP9XQ93008 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP9XQ93008 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.6■□□□□ 0.73
USP9XQ93008 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP9XQ93008 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP9XQ93008 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP9XQ93008 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.6■□□□□ 0.73
USP9XQ93008 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms