Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 AC137630.3-201ENST00000607245 391 ntBASIC19.95■□□□□ 0.78
SNX33Q8WV41 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX33Q8WV41 ECEL1P1-201ENST00000373592 1742 ntBASIC19.95■□□□□ 0.78
SNX33Q8WV41 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX33Q8WV41 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNX33Q8WV41 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX33Q8WV41 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX33Q8WV41 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX33Q8WV41 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 AC127496.7-201ENST00000625110 1798 ntBASIC19.93■□□□□ 0.78
SNX33Q8WV41 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX33Q8WV41 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX33Q8WV41 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX33Q8WV41 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX33Q8WV41 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX33Q8WV41 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNX33Q8WV41 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX33Q8WV41 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX33Q8WV41 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.92■□□□□ 0.78
SNX33Q8WV41 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.92■□□□□ 0.78
SNX33Q8WV41 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNX33Q8WV41 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SNX33Q8WV41 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX33Q8WV41 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNX33Q8WV41 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX33Q8WV41 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SNX33Q8WV41 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.91■□□□□ 0.78
SNX33Q8WV41 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.91■□□□□ 0.78
SNX33Q8WV41 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.91■□□□□ 0.78
SNX33Q8WV41 MIR4787-201ENST00000607364 84 ntBASIC19.91■□□□□ 0.78
SNX33Q8WV41 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX33Q8WV41 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX33Q8WV41 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX33Q8WV41 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.9■□□□□ 0.78
SNX33Q8WV41 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX33Q8WV41 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 ESRRAP2-201ENST00000418437 1549 ntBASIC19.9■□□□□ 0.78
SNX33Q8WV41 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX33Q8WV41 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX33Q8WV41 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNX33Q8WV41 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
SNX33Q8WV41 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNX33Q8WV41 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX33Q8WV41 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SNX33Q8WV41 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 AC079630.1-202ENST00000618127 1840 ntBASIC19.89■□□□□ 0.77
SNX33Q8WV41 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SNX33Q8WV41 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX33Q8WV41 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms