Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 AL117332.1-201ENST00000622628 974 ntBASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 AC233723.2-201ENST00000623798 2106 ntBASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDH19Q8TAB3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.97■■□□□ 1.27
PCDH19Q8TAB3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDH19Q8TAB3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 MIR3621-201ENST00000580529 85 ntBASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PCDH19Q8TAB3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDH19Q8TAB3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 AL356740.2-201ENST00000601559 647 ntBASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDH19Q8TAB3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 AC019069.1-201ENST00000610008 1333 ntBASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDH19Q8TAB3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDH19Q8TAB3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDH19Q8TAB3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms