Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 PVT1_1.1-201ENST00000615125 194 ntBASIC20.77■□□□□ 0.92
PIK3C3Q8NEB9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PIK3C3Q8NEB9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PIK3C3Q8NEB9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.77■□□□□ 0.91
PIK3C3Q8NEB9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.91
PIK3C3Q8NEB9 SLC25A24-204ENST00000569674 2357 ntBASIC20.77■□□□□ 0.91
PIK3C3Q8NEB9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PIK3C3Q8NEB9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C3Q8NEB9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PIK3C3Q8NEB9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.75■□□□□ 0.91
PIK3C3Q8NEB9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PIK3C3Q8NEB9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PIK3C3Q8NEB9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 YBX1P4-201ENST00000392794 808 ntBASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 MIR4508-201ENST00000584178 70 ntBASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PIK3C3Q8NEB9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PIK3C3Q8NEB9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PIK3C3Q8NEB9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 AC120024.1-201ENST00000562672 995 ntBASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 AL137060.1-201ENST00000618151 2648 ntBASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PIK3C3Q8NEB9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 KRT8P33-201ENST00000508125 1423 ntBASIC20.69■□□□□ 0.9
PIK3C3Q8NEB9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PIK3C3Q8NEB9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms