Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.15■■□□□ 1.62
RETREG2Q8NC44 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.14■■□□□ 1.62
RETREG2Q8NC44 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
RETREG2Q8NC44 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
RETREG2Q8NC44 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RETREG2Q8NC44 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
RETREG2Q8NC44 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 BX842568.3-201ENST00000418104 571 ntBASIC25.13■■□□□ 1.61
RETREG2Q8NC44 AC009086.3-201ENST00000623486 1008 ntBASIC25.13■■□□□ 1.61
RETREG2Q8NC44 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RETREG2Q8NC44 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.12■■□□□ 1.61
RETREG2Q8NC44 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
RETREG2Q8NC44 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 AC006455.2-201ENST00000429931 906 ntBASIC25.11■■□□□ 1.61
RETREG2Q8NC44 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RETREG2Q8NC44 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 MIR3181-201ENST00000578512 73 ntBASIC25.1■■□□□ 1.61
RETREG2Q8NC44 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETREG2Q8NC44 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.09■■□□□ 1.61
RETREG2Q8NC44 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RETREG2Q8NC44 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.09■■□□□ 1.61
RETREG2Q8NC44 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.09■■□□□ 1.61
RETREG2Q8NC44 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.09■■□□□ 1.61
RETREG2Q8NC44 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RETREG2Q8NC44 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RETREG2Q8NC44 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RETREG2Q8NC44 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.08■■□□□ 1.6
RETREG2Q8NC44 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RETREG2Q8NC44 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.07■■□□□ 1.6
RETREG2Q8NC44 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RETREG2Q8NC44 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.07■■□□□ 1.6
RETREG2Q8NC44 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.07■■□□□ 1.6
RETREG2Q8NC44 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
RETREG2Q8NC44 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.06■■□□□ 1.6
RETREG2Q8NC44 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RETREG2Q8NC44 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms