Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 KRT18P14-201ENST00000534205 1250 ntBASIC20.92■□□□□ 0.94
EXD3Q8N9H8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXD3Q8N9H8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 MIR572-201ENST00000384983 95 ntBASIC20.91■□□□□ 0.94
EXD3Q8N9H8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 AC012414.1-201ENST00000556676 535 ntBASIC20.91■□□□□ 0.94
EXD3Q8N9H8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
EXD3Q8N9H8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 pRNA.6-201ENST00000610482 90 ntBASIC20.9■□□□□ 0.94
EXD3Q8N9H8 pRNA.5-201ENST00000612139 90 ntBASIC20.9■□□□□ 0.94
EXD3Q8N9H8 pRNA.11-201ENST00000618423 90 ntBASIC20.9■□□□□ 0.94
EXD3Q8N9H8 pRNA.13-201ENST00000619112 90 ntBASIC20.9■□□□□ 0.94
EXD3Q8N9H8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
EXD3Q8N9H8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.89■□□□□ 0.94
EXD3Q8N9H8 ABHD17AP1-201ENST00000358206 933 ntBASIC20.89■□□□□ 0.93
EXD3Q8N9H8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
EXD3Q8N9H8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 TERF1P2-201ENST00000583350 1212 ntBASIC20.88■□□□□ 0.93
EXD3Q8N9H8 AL354811.1-201ENST00000610286 706 ntBASIC20.88■□□□□ 0.93
EXD3Q8N9H8 AC080038.1-201ENST00000611274 1154 ntBASIC20.88■□□□□ 0.93
EXD3Q8N9H8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.88■□□□□ 0.93
EXD3Q8N9H8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXD3Q8N9H8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 IGHV3-19-201ENST00000521488 291 ntBASIC20.87■□□□□ 0.93
EXD3Q8N9H8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXD3Q8N9H8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 AC004812.2-201ENST00000611079 2094 ntBASIC20.86■□□□□ 0.93
EXD3Q8N9H8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXD3Q8N9H8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.85■□□□□ 0.93
EXD3Q8N9H8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EXD3Q8N9H8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms