Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LINC00471Q8N535 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC00471Q8N535 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC00471Q8N535 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 ABHD17AP5-201ENST00000580133 923 ntBASIC20.32■□□□□ 0.84
LINC00471Q8N535 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LINC00471Q8N535 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC00471Q8N535 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 C11orf96-202ENST00000528572 1834 ntBASIC20.32■□□□□ 0.84
LINC00471Q8N535 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC00471Q8N535 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.31■□□□□ 0.84
LINC00471Q8N535 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.31■□□□□ 0.84
LINC00471Q8N535 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.31■□□□□ 0.84
LINC00471Q8N535 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.31■□□□□ 0.84
LINC00471Q8N535 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
LINC00471Q8N535 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00471Q8N535 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00471Q8N535 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00471Q8N535 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LINC00471Q8N535 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC00471Q8N535 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00471Q8N535 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00471Q8N535 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00471Q8N535 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00471Q8N535 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00471Q8N535 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.29■□□□□ 0.84
LINC00471Q8N535 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC00471Q8N535 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00471Q8N535 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00471Q8N535 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LINC00471Q8N535 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00471Q8N535 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00471Q8N535 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00471Q8N535 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00471Q8N535 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00471Q8N535 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC00471Q8N535 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00471Q8N535 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00471Q8N535 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00471Q8N535 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC00471Q8N535 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
LINC00471Q8N535 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00471Q8N535 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00471Q8N535 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00471Q8N535 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00471Q8N535 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.27■□□□□ 0.84
LINC00471Q8N535 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00471Q8N535 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00471Q8N535 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00471Q8N535 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00471Q8N535 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 FP325331.1-202ENST00000623531 1380 ntBASIC20.26■□□□□ 0.83
LINC00471Q8N535 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00471Q8N535 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00471Q8N535 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00471Q8N535 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00471Q8N535 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00471Q8N535 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC00471Q8N535 AC087742.1-201ENST00000575880 1738 ntBASIC20.25■□□□□ 0.83
LINC00471Q8N535 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LINC00471Q8N535 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00471Q8N535 ATP5G2P3-201ENST00000429083 425 ntBASIC20.25■□□□□ 0.83
LINC00471Q8N535 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC00471Q8N535 SNX5-217ENST00000606557 1087 ntBASIC20.25■□□□□ 0.83
LINC00471Q8N535 PVT1_1.1-201ENST00000615125 194 ntBASIC20.25■□□□□ 0.83
LINC00471Q8N535 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00471Q8N535 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00471Q8N535 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms