Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.08■□□□□ 0.97
ARHGEF39Q8N4T4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARHGEF39Q8N4T4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.07■□□□□ 0.96
ARHGEF39Q8N4T4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 AF213884.3-201ENST00000563833 479 ntBASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARHGEF39Q8N4T4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 BX842568.3-201ENST00000418104 571 ntBASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.05■□□□□ 0.96
ARHGEF39Q8N4T4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 OR2I1P-207ENST00000453522 948 ntBASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 AC019069.1-201ENST00000610008 1333 ntBASIC21.04■□□□□ 0.96
ARHGEF39Q8N4T4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.03■□□□□ 0.96
ARHGEF39Q8N4T4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ARHGEF39Q8N4T4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ARHGEF39Q8N4T4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ARHGEF39Q8N4T4 AC142381.2-201ENST00000566120 298 ntBASIC21.03■□□□□ 0.96
ARHGEF39Q8N4T4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ARHGEF39Q8N4T4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 AC091305.1-201ENST00000479476 895 ntBASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ARHGEF39Q8N4T4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
ARHGEF39Q8N4T4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ARHGEF39Q8N4T4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.02■□□□□ 0.95
ARHGEF39Q8N4T4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
ARHGEF39Q8N4T4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.01■□□□□ 0.95
ARHGEF39Q8N4T4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms