Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST3H2BBQ8N257 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 AL133380.1-201ENST00000506013 324 ntBASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST3H2BBQ8N257 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 LINC01006-201ENST00000333319 2292 ntBASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST3H2BBQ8N257 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 AC010542.4-201ENST00000563151 1910 ntBASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 LETM1P2-201ENST00000597330 2178 ntBASIC16.71■□□□□ 0.27
HIST3H2BBQ8N257 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST3H2BBQ8N257 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HIST3H2BBQ8N257 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 AC079630.1-202ENST00000618127 1840 ntBASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST3H2BBQ8N257 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms