Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CROCCP3Q8IVE0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 AC139530.1-201ENST00000575312 1977 ntBASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 HLA-V-202ENST00000446817 847 ntBASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CROCCP3Q8IVE0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.08■□□□□ 0.81
CROCCP3Q8IVE0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CROCCP3Q8IVE0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CROCCP3Q8IVE0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CROCCP3Q8IVE0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CROCCP3Q8IVE0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CROCCP3Q8IVE0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 AL162393.1-201ENST00000437852 946 ntBASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 AC005229.4-201ENST00000610085 2198 ntBASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CROCCP3Q8IVE0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.06■□□□□ 0.8
CROCCP3Q8IVE0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CROCCP3Q8IVE0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CROCCP3Q8IVE0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 MIR3960-201ENST00000583311 91 ntBASIC20.03■□□□□ 0.8
CROCCP3Q8IVE0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms