Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPH3Q86UC2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPH3Q86UC2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
RSPH3Q86UC2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RSPH3Q86UC2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 MIR6084-201ENST00000622012 110 ntBASIC24.53■■□□□ 1.52
RSPH3Q86UC2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
RSPH3Q86UC2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.52■■□□□ 1.52
RSPH3Q86UC2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 AL031602.1-201ENST00000633169 911 ntBASIC24.51■■□□□ 1.51
RSPH3Q86UC2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RSPH3Q86UC2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.5■■□□□ 1.51
RSPH3Q86UC2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RSPH3Q86UC2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.5■■□□□ 1.51
RSPH3Q86UC2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RSPH3Q86UC2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RSPH3Q86UC2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.49■■□□□ 1.51
RSPH3Q86UC2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 KRT18P5-201ENST00000436075 1291 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L2-201ENST00000561772 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 AC020928.2-201ENST00000588717 2197 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L6-201ENST00000626483 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L1-201ENST00000627662 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L8-201ENST00000629013 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L3-201ENST00000630187 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L7-201ENST00000630678 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 DUX4L5-201ENST00000630834 1275 ntBASIC24.48■■□□□ 1.51
RSPH3Q86UC2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RSPH3Q86UC2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RSPH3Q86UC2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RSPH3Q86UC2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RSPH3Q86UC2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RSPH3Q86UC2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.46■■□□□ 1.51
RSPH3Q86UC2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms