Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.9□□□□□ -0.5
LCA10Q71F78 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LCA10Q71F78 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LCA10Q71F78 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.9□□□□□ -0.5
LCA10Q71F78 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LCA10Q71F78 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LCA10Q71F78 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 EED-207ENST00000528180 1745 ntTSL 5 BASIC11.89□□□□□ -0.51
LCA10Q71F78 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LCA10Q71F78 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 AL359258.2-201ENST00000564063 1566 ntBASIC11.89□□□□□ -0.51
LCA10Q71F78 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LCA10Q71F78 AC148477.6-201ENST00000623746 465 ntBASIC11.89□□□□□ -0.51
LCA10Q71F78 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LCA10Q71F78 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC11.89□□□□□ -0.51
LCA10Q71F78 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LCA10Q71F78 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC11.88□□□□□ -0.51
LCA10Q71F78 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC11.88□□□□□ -0.51
LCA10Q71F78 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC11.88□□□□□ -0.51
LCA10Q71F78 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 AL359504.2-201ENST00000605506 1601 ntBASIC11.88□□□□□ -0.51
LCA10Q71F78 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LCA10Q71F78 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.88□□□□□ -0.51
LCA10Q71F78 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LCA10Q71F78 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC11.87□□□□□ -0.51
LCA10Q71F78 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC11.87□□□□□ -0.51
LCA10Q71F78 CHST11-203ENST00000547956 936 ntTSL 2 BASIC11.87□□□□□ -0.51
LCA10Q71F78 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC11.87□□□□□ -0.51
LCA10Q71F78 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC11.87□□□□□ -0.51
LCA10Q71F78 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LCA10Q71F78 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LCA10Q71F78 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LCA10Q71F78 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC11.87□□□□□ -0.51
LCA10Q71F78 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC11.87□□□□□ -0.51
LCA10Q71F78 GUSBP5-202ENST00000510805 1989 ntBASIC11.87□□□□□ -0.51
LCA10Q71F78 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
LCA10Q71F78 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC11.86□□□□□ -0.51
LCA10Q71F78 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC11.86□□□□□ -0.51
LCA10Q71F78 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LCA10Q71F78 ECEL1P1-201ENST00000373592 1742 ntBASIC11.86□□□□□ -0.51
LCA10Q71F78 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LCA10Q71F78 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC11.86□□□□□ -0.51
LCA10Q71F78 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LCA10Q71F78 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LCA10Q71F78 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LCA10Q71F78 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC11.86□□□□□ -0.51
LCA10Q71F78 DUX4L11-201ENST00000611504 1267 ntBASIC11.86□□□□□ -0.51
LCA10Q71F78 DUX4L12-201ENST00000614593 1267 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms