Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS13CQ709C8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS13CQ709C8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS13CQ709C8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS13CQ709C8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS13CQ709C8 MIR4651-201ENST00000582622 73 ntBASIC18.75■□□□□ 0.59
VPS13CQ709C8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.75■□□□□ 0.59
VPS13CQ709C8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS13CQ709C8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
VPS13CQ709C8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS13CQ709C8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS13CQ709C8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS13CQ709C8 AL109923.1-201ENST00000618799 583 ntBASIC18.75■□□□□ 0.59
VPS13CQ709C8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 AC142086.2-201ENST00000569753 217 ntBASIC18.74■□□□□ 0.59
VPS13CQ709C8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 AC004854.2-201ENST00000608450 1441 ntBASIC18.74■□□□□ 0.59
VPS13CQ709C8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS13CQ709C8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS13CQ709C8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS13CQ709C8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS13CQ709C8 MIR663A-201ENST00000385250 93 ntBASIC18.72■□□□□ 0.59
VPS13CQ709C8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS13CQ709C8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 DUSP8P4-201ENST00000399538 1761 ntBASIC18.72■□□□□ 0.59
VPS13CQ709C8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS13CQ709C8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 AC137761.2-201ENST00000561729 223 ntBASIC18.72■□□□□ 0.59
VPS13CQ709C8 AC145350.3-201ENST00000569033 163 ntBASIC18.72■□□□□ 0.59
VPS13CQ709C8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS13CQ709C8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VPS13CQ709C8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS13CQ709C8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS13CQ709C8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS13CQ709C8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS13CQ709C8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VPS13CQ709C8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS13CQ709C8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
VPS13CQ709C8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
VPS13CQ709C8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS13CQ709C8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS13CQ709C8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS13CQ709C8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS13CQ709C8 AC009086.3-201ENST00000623486 1008 ntBASIC18.69■□□□□ 0.58
VPS13CQ709C8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms