Protein–RNA interactions for Protein: Q6ZRS4

CCDC129, Coiled-coil domain-containing protein 129, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC129Q6ZRS4 pRNA.13-201ENST00000619112 90 ntBASIC26.75■■□□□ 1.87
CCDC129Q6ZRS4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC129Q6ZRS4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC129Q6ZRS4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC129Q6ZRS4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC129Q6ZRS4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 MIR638-201ENST00000385237 100 ntBASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 MIR3181-201ENST00000578512 73 ntBASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC129Q6ZRS4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 UNC93B3-201ENST00000308076 687 ntBASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC129Q6ZRS4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 AC110285.6-201ENST00000617652 491 ntBASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 SYT6-210ENST00000641643 1587 ntBASIC26.71■■□□□ 1.87
CCDC129Q6ZRS4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.7■■□□□ 1.87
CCDC129Q6ZRS4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.7■■□□□ 1.87
CCDC129Q6ZRS4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.7■■□□□ 1.87
CCDC129Q6ZRS4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.7■■□□□ 1.86
CCDC129Q6ZRS4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC129Q6ZRS4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC129Q6ZRS4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.69■■□□□ 1.86
CCDC129Q6ZRS4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC129Q6ZRS4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.69■■□□□ 1.86
CCDC129Q6ZRS4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 AL499627.2-201ENST00000606283 725 ntBASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC129Q6ZRS4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC129Q6ZRS4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.67■■□□□ 1.86
CCDC129Q6ZRS4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC129Q6ZRS4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.67■■□□□ 1.86
CCDC129Q6ZRS4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CCDC129Q6ZRS4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC129Q6ZRS4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 AC004687.1-201ENST00000579003 1625 ntBASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 AC024257.2-201ENST00000549699 147 ntBASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC129Q6ZRS4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 AL139246.5-201ENST00000606645 996 ntBASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 AL136162.1-201ENST00000607711 1078 ntBASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.65■■□□□ 1.86
CCDC129Q6ZRS4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms