Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 AL158047.1-201ENST00000445918 881 ntBASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 DUX4L16-201ENST00000555130 1264 ntBASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 NIFKP4-201ENST00000567275 1192 ntBASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 SLC7A5P1-201ENST00000568957 537 ntBASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.37■■□□□ 1.49
CHRDL2Q6WN34 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.36■■□□□ 1.49
CHRDL2Q6WN34 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHRDL2Q6WN34 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHRDL2Q6WN34 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.36■■□□□ 1.49
CHRDL2Q6WN34 AC010331.1-201ENST00000611423 582 ntBASIC24.36■■□□□ 1.49
CHRDL2Q6WN34 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 AF201337.1-201ENST00000520239 748 ntBASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDL2Q6WN34 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDL2Q6WN34 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC24.33■■□□□ 1.49
CHRDL2Q6WN34 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CHRDL2Q6WN34 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
CHRDL2Q6WN34 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
CHRDL2Q6WN34 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CHRDL2Q6WN34 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.32■■□□□ 1.48
CHRDL2Q6WN34 AC105036.2-201ENST00000569468 176 ntBASIC24.32■■□□□ 1.48
CHRDL2Q6WN34 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC24.32■■□□□ 1.48
CHRDL2Q6WN34 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHRDL2Q6WN34 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 ECEL1P3-201ENST00000427961 737 ntBASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 FAM210CP-201ENST00000445714 574 ntBASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDL2Q6WN34 BX005040.4-201ENST00000637145 1518 ntBASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHRDL2Q6WN34 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 AC142381.4-202ENST00000563973 229 ntBASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CHRDL2Q6WN34 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CHRDL2Q6WN34 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms