Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
FOXR2Q6PJQ5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
FOXR2Q6PJQ5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
FOXR2Q6PJQ5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 MIR6724-1-201ENST00000616420 92 ntBASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 MIR6724-2-201ENST00000616483 92 ntBASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 MIR6724-4-201ENST00000617390 92 ntBASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 MIR6724-3-201ENST00000622482 92 ntBASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.33■■□□□ 1.49
FOXR2Q6PJQ5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
FOXR2Q6PJQ5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR2Q6PJQ5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR2Q6PJQ5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR2Q6PJQ5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
FOXR2Q6PJQ5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
FOXR2Q6PJQ5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
FOXR2Q6PJQ5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR2Q6PJQ5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR2Q6PJQ5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR2Q6PJQ5 UNC93B8-201ENST00000511903 705 ntBASIC24.31■■□□□ 1.48
FOXR2Q6PJQ5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR2Q6PJQ5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
FOXR2Q6PJQ5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR2Q6PJQ5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.3■■□□□ 1.48
FOXR2Q6PJQ5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR2Q6PJQ5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR2Q6PJQ5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
FOXR2Q6PJQ5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
FOXR2Q6PJQ5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 TSPY9P-201ENST00000440215 945 ntBASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 TSPY11P-201ENST00000442607 1045 ntBASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 AL499627.2-201ENST00000606283 725 ntBASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
FOXR2Q6PJQ5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 AC139530.1-201ENST00000575312 1977 ntBASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 EP400NL-214ENST00000641289 2402 ntBASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
FOXR2Q6PJQ5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
FOXR2Q6PJQ5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
FOXR2Q6PJQ5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 AL035685.1-201ENST00000636663 812 ntBASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
FOXR2Q6PJQ5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms