Protein–RNA interactions for Protein: Q1ZZU3

SWI5, DNA repair protein SWI5 homolog, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5Q1ZZU3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SWI5Q1ZZU3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SWI5Q1ZZU3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SWI5Q1ZZU3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SWI5Q1ZZU3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 PBX2P1-201ENST00000493219 1291 ntBASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SWI5Q1ZZU3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SWI5Q1ZZU3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 AL136162.1-201ENST00000607711 1078 ntBASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.44■□□□□ 0.7
SWI5Q1ZZU3 AC009102.2-201ENST00000606772 1639 ntBASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 DUX4L19-201ENST00000557448 1267 ntBASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SWI5Q1ZZU3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 AC135279.3-201ENST00000610945 1311 ntBASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.42■□□□□ 0.7
SWI5Q1ZZU3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 AC092171.4-201ENST00000609130 632 ntBASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWI5Q1ZZU3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 LINC01124-201ENST00000409786 2117 ntBASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.4■□□□□ 0.7
SWI5Q1ZZU3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SWI5Q1ZZU3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
SWI5Q1ZZU3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWI5Q1ZZU3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SWI5Q1ZZU3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.39■□□□□ 0.69
SWI5Q1ZZU3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SWI5Q1ZZU3 AC024257.2-201ENST00000549699 147 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms