Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRP1Q07954 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRP1Q07954 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRP1Q07954 GPX1P1-201ENST00000388829 606 ntBASIC13.35□□□□□ -0.27
LRP1Q07954 AC093827.2-201ENST00000512654 315 ntBASIC13.35□□□□□ -0.27
LRP1Q07954 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRP1Q07954 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRP1Q07954 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LRP1Q07954 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRP1Q07954 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.34□□□□□ -0.27
LRP1Q07954 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.34□□□□□ -0.27
LRP1Q07954 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRP1Q07954 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LRP1Q07954 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.34□□□□□ -0.27
LRP1Q07954 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.34□□□□□ -0.27
LRP1Q07954 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.34□□□□□ -0.27
LRP1Q07954 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.34□□□□□ -0.27
LRP1Q07954 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRP1Q07954 AC092803.2-201ENST00000564287 1899 ntBASIC13.34□□□□□ -0.27
LRP1Q07954 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LRP1Q07954 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.33□□□□□ -0.27
LRP1Q07954 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRP1Q07954 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LRP1Q07954 SLC7A5P2-201ENST00000553010 536 ntBASIC13.33□□□□□ -0.28
LRP1Q07954 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.33□□□□□ -0.28
LRP1Q07954 AP004607.4-201ENST00000530158 1459 ntBASIC13.33□□□□□ -0.28
LRP1Q07954 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRP1Q07954 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LRP1Q07954 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRP1Q07954 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRP1Q07954 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRP1Q07954 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRP1Q07954 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LRP1Q07954 OR2I1P-207ENST00000453522 948 ntBASIC13.33□□□□□ -0.28
LRP1Q07954 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.33□□□□□ -0.28
LRP1Q07954 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRP1Q07954 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRP1Q07954 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
LRP1Q07954 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.32□□□□□ -0.28
LRP1Q07954 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.32□□□□□ -0.28
LRP1Q07954 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LRP1Q07954 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.32□□□□□ -0.28
LRP1Q07954 AC098934.4-201ENST00000564127 592 ntBASIC13.32□□□□□ -0.28
LRP1Q07954 MIR6089-201ENST00000616698 64 ntBASIC13.32□□□□□ -0.28
LRP1Q07954 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC13.32□□□□□ -0.28
LRP1Q07954 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.32□□□□□ -0.28
LRP1Q07954 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.32□□□□□ -0.28
LRP1Q07954 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LRP1Q07954 AC141586.4-201ENST00000624558 1573 ntBASIC13.32□□□□□ -0.28
LRP1Q07954 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRP1Q07954 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRP1Q07954 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRP1Q07954 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.32□□□□□ -0.28
LRP1Q07954 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.32□□□□□ -0.28
LRP1Q07954 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.32□□□□□ -0.28
LRP1Q07954 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRP1Q07954 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC13.32□□□□□ -0.28
LRP1Q07954 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.32□□□□□ -0.28
LRP1Q07954 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.32□□□□□ -0.28
LRP1Q07954 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.31□□□□□ -0.28
LRP1Q07954 CD99P1-205ENST00000527459 561 ntBASIC13.31□□□□□ -0.28
LRP1Q07954 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LRP1Q07954 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRP1Q07954 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 AC069152.1-201ENST00000438030 544 ntBASIC13.31□□□□□ -0.28
LRP1Q07954 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRP1Q07954 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.31□□□□□ -0.28
LRP1Q07954 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRP1Q07954 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.31□□□□□ -0.28
LRP1Q07954 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRP1Q07954 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.3□□□□□ -0.28
LRP1Q07954 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRP1Q07954 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.3□□□□□ -0.28
LRP1Q07954 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRP1Q07954 LSR-205ENST00000427250 1606 ntTSL 2 BASIC13.3□□□□□ -0.28
LRP1Q07954 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LRP1Q07954 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRP1Q07954 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.3□□□□□ -0.28
LRP1Q07954 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms