Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YKL071WYKL071W 771 nt4.68□□□□□ -1.66
VPS38Q05919 SPC3YLR066W 555 nt4.68□□□□□ -1.66
VPS38Q05919 PBN1YCL052C 1251 nt4.68□□□□□ -1.66
VPS38Q05919 MSE1YOL033W 1611 nt4.68□□□□□ -1.66
VPS38Q05919 MDL1YLR188W 2088 nt4.68□□□□□ -1.66
VPS38Q05919 RTC1YOL138C 4026 nt4.68□□□□□ -1.66
VPS38Q05919 GSY1YFR015C 2127 nt4.67□□□□□ -1.66
VPS38Q05919 ALG9YNL219C 1668 nt4.67□□□□□ -1.66
VPS38Q05919 VAC7YNL054W 3498 nt4.67□□□□□ -1.66
VPS38Q05919 GCV1YDR019C 1203 nt4.67□□□□□ -1.66
VPS38Q05919 YGR016WYGR016W 573 nt4.67□□□□□ -1.66
VPS38Q05919 YHL034W-AYHL034W-A 462 nt4.67□□□□□ -1.66
VPS38Q05919 ISA1YLL027W 753 nt4.67□□□□□ -1.66
VPS38Q05919 PCL1YNL289W 840 nt4.67□□□□□ -1.66
VPS38Q05919 PFA4YOL003C 1137 nt4.67□□□□□ -1.66
VPS38Q05919 MGR2YPL098C 342 nt4.67□□□□□ -1.66
VPS38Q05919 RAD7YJR052W 1698 nt4.67□□□□□ -1.66
VPS38Q05919 LAP3YNL239W 1365 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)CtQ(UUG)C 72 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)D1tQ(UUG)D1 72 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)D2tQ(UUG)D2 72 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)D3tQ(UUG)D3 72 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)E1tQ(UUG)E1 72 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)HtQ(UUG)H 72 nt4.66□□□□□ -1.66
VPS38Q05919 tQ(UUG)LtQ(UUG)L 72 nt4.66□□□□□ -1.66
VPS38Q05919 CDA2YLR308W 939 nt4.66□□□□□ -1.66
VPS38Q05919 YOR020W-AYOR020W-A 273 nt4.66□□□□□ -1.66
VPS38Q05919 YDC1YPL087W 954 nt4.66□□□□□ -1.66
VPS38Q05919 YPL114WYPL114W 420 nt4.66□□□□□ -1.66
VPS38Q05919 EMP47YFL048C 1338 nt4.66□□□□□ -1.66
VPS38Q05919 ALD3YMR169C 1521 nt4.66□□□□□ -1.66
VPS38Q05919 ALD2YMR170C 1521 nt4.66□□□□□ -1.66
VPS38Q05919 TRF5YNL299W 1929 nt4.66□□□□□ -1.66
VPS38Q05919 PUS9YDL036C 1389 nt4.65□□□□□ -1.66
VPS38Q05919 KTR7YIL085C 1554 nt4.65□□□□□ -1.66
VPS38Q05919 SFH5YJL145W 885 nt4.65□□□□□ -1.67
VPS38Q05919 FMP33YJL161W 543 nt4.65□□□□□ -1.67
VPS38Q05919 BLS1YLR408C 369 nt4.65□□□□□ -1.67
VPS38Q05919 ECM23YPL021W 564 nt4.65□□□□□ -1.67
VPS38Q05919 OPY2YPR075C 1083 nt4.65□□□□□ -1.67
VPS38Q05919 MET16YPR167C 786 nt4.65□□□□□ -1.67
VPS38Q05919 JHD2YJR119C 2187 nt4.65□□□□□ -1.67
VPS38Q05919 RKM2YDR198C 1440 nt4.64□□□□□ -1.67
VPS38Q05919 BUD30YDL151C 582 nt4.64□□□□□ -1.67
VPS38Q05919 DIN7YDR263C 1293 nt4.64□□□□□ -1.67
VPS38Q05919 RPB7YDR404C 516 nt4.64□□□□□ -1.67
VPS38Q05919 ACT1YFL039C 1128 nt4.64□□□□□ -1.67
VPS38Q05919 IRC6YFR043C 714 nt4.64□□□□□ -1.67
VPS38Q05919 YGL199CYGL199C 471 nt4.64□□□□□ -1.67
VPS38Q05919 FRA2YGL220W 363 nt4.64□□□□□ -1.67
VPS38Q05919 SOL4YGR248W 768 nt4.64□□□□□ -1.67
VPS38Q05919 YIL163CYIL163C 354 nt4.64□□□□□ -1.67
VPS38Q05919 YLR407WYLR407W 687 nt4.64□□□□□ -1.67
VPS38Q05919 MRM1YOR201C 1239 nt4.64□□□□□ -1.67
VPS38Q05919 BUD8YLR353W 1812 nt4.64□□□□□ -1.67
VPS38Q05919 RAD16YBR114W 2373 nt4.64□□□□□ -1.67
VPS38Q05919 SAC1YKL212W 1872 nt4.64□□□□□ -1.67
VPS38Q05919 RIA1YNL163C 3333 nt4.64□□□□□ -1.67
VPS38Q05919 SKG1YKR100C 1068 nt4.63□□□□□ -1.67
VPS38Q05919 ELO3YLR372W 1038 nt4.63□□□□□ -1.67
VPS38Q05919 YLR412C-AYLR412C-A 207 nt4.63□□□□□ -1.67
VPS38Q05919 SUI1YNL244C 327 nt4.63□□□□□ -1.67
VPS38Q05919 MET12YPL023C 1974 nt4.63□□□□□ -1.67
VPS38Q05919 KCC4YCL024W 3114 nt4.63□□□□□ -1.67
VPS38Q05919 VPS73YGL104C 1461 nt4.62□□□□□ -1.67
VPS38Q05919 MPC1YGL080W 393 nt4.62□□□□□ -1.67
VPS38Q05919 YIL171WYIL171W 330 nt4.62□□□□□ -1.67
VPS38Q05919 YLR125WYLR125W 411 nt4.62□□□□□ -1.67
VPS38Q05919 NKP2YLR315W 462 nt4.62□□□□□ -1.67
VPS38Q05919 PRP28YDR243C 1767 nt4.62□□□□□ -1.67
VPS38Q05919 HFA1YMR207C 6372 nt4.62□□□□□ -1.67
VPS38Q05919 FBP26YJL155C 1359 nt4.62□□□□□ -1.67
VPS38Q05919 LAS1YKR063C 1509 nt4.62□□□□□ -1.67
VPS38Q05919 IME4YGL192W 1803 nt4.61□□□□□ -1.67
VPS38Q05919 TPO2YGR138C 1845 nt4.61□□□□□ -1.67
VPS38Q05919 YDL124WYDL124W 939 nt4.61□□□□□ -1.67
VPS38Q05919 RPL24AYGL031C 468 nt4.61□□□□□ -1.67
VPS38Q05919 YGR269WYGR269W 327 nt4.61□□□□□ -1.67
VPS38Q05919 tR(ACG)JtR(ACG)J 73 nt4.61□□□□□ -1.67
VPS38Q05919 YIL089WYIL089W 618 nt4.61□□□□□ -1.67
VPS38Q05919 SEC72YLR292C 582 nt4.61□□□□□ -1.67
VPS38Q05919 VPS71YML041C 843 nt4.61□□□□□ -1.67
VPS38Q05919 YMR315WYMR315W 1050 nt4.61□□□□□ -1.67
VPS38Q05919 CMR3YPR013C 954 nt4.61□□□□□ -1.67
VPS38Q05919 SKG6YHR149C 2205 nt4.61□□□□□ -1.67
VPS38Q05919 KIN28YDL108W 921 nt4.6□□□□□ -1.67
VPS38Q05919 PRE9YGR135W 777 nt4.6□□□□□ -1.67
VPS38Q05919 YAL056C-AYAL056C-A 351 nt4.6□□□□□ -1.67
VPS38Q05919 ATG33YLR356W 594 nt4.6□□□□□ -1.67
VPS38Q05919 YLR462WYLR462W 609 nt4.6□□□□□ -1.67
VPS38Q05919 YMR075C-AYMR075C-A 366 nt4.6□□□□□ -1.67
VPS38Q05919 TGL4YKR089C 2733 nt4.6□□□□□ -1.67
VPS38Q05919 YOL153CYOL153C 1746 nt4.6□□□□□ -1.67
VPS38Q05919 MEF2YJL102W 2460 nt4.6□□□□□ -1.67
VPS38Q05919 YDR261C-DYDR261C-D 4815 nt4.59□□□□□ -1.67
VPS38Q05919 YER067C-AYER067C-A 324 nt4.59□□□□□ -1.67
VPS38Q05919 YGR204C-AYGR204C-A 114 nt4.59□□□□□ -1.67
VPS38Q05919 MRPL6YHR147C 645 nt4.59□□□□□ -1.67
VPS38Q05919 RDN5-1RDN5-1 121 nt4.59□□□□□ -1.67
VPS38Q05919 YLR049CYLR049C 1287 nt4.59□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms