Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST1H3AP68431 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HIST1H3AP68431 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H3AP68431 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H3AP68431 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H3AP68431 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H3AP68431 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H3AP68431 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST1H3AP68431 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.43■□□□□ 0.7
HIST1H3AP68431 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H3AP68431 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HIST1H3AP68431 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H3AP68431 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.42■□□□□ 0.7
HIST1H3AP68431 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST1H3AP68431 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H3AP68431 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HIST1H3AP68431 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST1H3AP68431 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HIST1H3AP68431 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 AL117332.1-201ENST00000622628 974 ntBASIC19.41■□□□□ 0.7
HIST1H3AP68431 AC009086.3-201ENST00000623486 1008 ntBASIC19.41■□□□□ 0.7
HIST1H3AP68431 AC233723.2-201ENST00000623798 2106 ntBASIC19.41■□□□□ 0.7
HIST1H3AP68431 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST1H3AP68431 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HIST1H3AP68431 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.4■□□□□ 0.7
HIST1H3AP68431 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST1H3AP68431 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H3AP68431 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST1H3AP68431 MIR3621-201ENST00000580529 85 ntBASIC19.4■□□□□ 0.7
HIST1H3AP68431 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H3AP68431 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HIST1H3AP68431 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.4■□□□□ 0.7
HIST1H3AP68431 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.4■□□□□ 0.7
HIST1H3AP68431 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HIST1H3AP68431 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HIST1H3AP68431 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.39■□□□□ 0.69
HIST1H3AP68431 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.39■□□□□ 0.69
HIST1H3AP68431 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HIST1H3AP68431 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H3AP68431 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H3AP68431 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
HIST1H3AP68431 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H3AP68431 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.38■□□□□ 0.69
HIST1H3AP68431 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H3AP68431 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H3AP68431 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIST1H3AP68431 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.38■□□□□ 0.69
HIST1H3AP68431 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.38■□□□□ 0.69
HIST1H3AP68431 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.38■□□□□ 0.69
HIST1H3AP68431 AL356740.2-201ENST00000601559 647 ntBASIC19.38■□□□□ 0.69
HIST1H3AP68431 AL117328.2-201ENST00000624617 1940 ntBASIC19.38■□□□□ 0.69
HIST1H3AP68431 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HIST1H3AP68431 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H3AP68431 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H3AP68431 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
HIST1H3AP68431 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H3AP68431 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H3AP68431 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST1H3AP68431 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
HIST1H3AP68431 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIST1H3AP68431 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.37■□□□□ 0.69
HIST1H3AP68431 AC127496.7-201ENST00000625110 1798 ntBASIC19.37■□□□□ 0.69
HIST1H3AP68431 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.36■□□□□ 0.69
HIST1H3AP68431 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms