Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.3■□□□□ 0.68
SEC61A1P61619 AC010997.5-201ENST00000609182 354 ntBASIC19.3■□□□□ 0.68
SEC61A1P61619 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.29■□□□□ 0.68
SEC61A1P61619 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SEC61A1P61619 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SEC61A1P61619 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.29■□□□□ 0.68
SEC61A1P61619 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.29■□□□□ 0.68
SEC61A1P61619 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SEC61A1P61619 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SEC61A1P61619 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.28■□□□□ 0.68
SEC61A1P61619 GUSBP5-202ENST00000510805 1989 ntBASIC19.28■□□□□ 0.68
SEC61A1P61619 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A1P61619 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SEC61A1P61619 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.28■□□□□ 0.68
SEC61A1P61619 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.28■□□□□ 0.68
SEC61A1P61619 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A1P61619 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A1P61619 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A1P61619 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEC61A1P61619 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SEC61A1P61619 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SEC61A1P61619 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SEC61A1P61619 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SEC61A1P61619 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEC61A1P61619 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SEC61A1P61619 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.27■□□□□ 0.67
SEC61A1P61619 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SEC61A1P61619 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SEC61A1P61619 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEC61A1P61619 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEC61A1P61619 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.26■□□□□ 0.67
SEC61A1P61619 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEC61A1P61619 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.26■□□□□ 0.67
SEC61A1P61619 SNX5-217ENST00000606557 1087 ntBASIC19.26■□□□□ 0.67
SEC61A1P61619 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.26■□□□□ 0.67
SEC61A1P61619 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.26■□□□□ 0.67
SEC61A1P61619 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SEC61A1P61619 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.26■□□□□ 0.67
SEC61A1P61619 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEC61A1P61619 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEC61A1P61619 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEC61A1P61619 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEC61A1P61619 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEC61A1P61619 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.25■□□□□ 0.67
SEC61A1P61619 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SEC61A1P61619 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.25■□□□□ 0.67
SEC61A1P61619 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.25■□□□□ 0.67
SEC61A1P61619 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEC61A1P61619 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEC61A1P61619 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEC61A1P61619 ECEL1P1-201ENST00000373592 1742 ntBASIC19.25■□□□□ 0.67
SEC61A1P61619 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
SEC61A1P61619 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SEC61A1P61619 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SEC61A1P61619 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.24■□□□□ 0.67
SEC61A1P61619 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SEC61A1P61619 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.24■□□□□ 0.67
SEC61A1P61619 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SEC61A1P61619 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.24■□□□□ 0.67
SEC61A1P61619 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SEC61A1P61619 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC61A1P61619 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC61A1P61619 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC61A1P61619 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.23■□□□□ 0.67
SEC61A1P61619 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
SEC61A1P61619 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC61A1P61619 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.23■□□□□ 0.67
SEC61A1P61619 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.23■□□□□ 0.67
SEC61A1P61619 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SEC61A1P61619 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms