Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PER3P56645 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
PER3P56645 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PER3P56645 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PER3P56645 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PER3P56645 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.39■□□□□ 0.85
PER3P56645 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PER3P56645 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.39■□□□□ 0.85
PER3P56645 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.39■□□□□ 0.85
PER3P56645 AC233992.3-201ENST00000607491 485 ntBASIC20.39■□□□□ 0.85
PER3P56645 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PER3P56645 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.39■□□□□ 0.85
PER3P56645 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.39■□□□□ 0.85
PER3P56645 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PER3P56645 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PER3P56645 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.38■□□□□ 0.85
PER3P56645 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.38■□□□□ 0.85
PER3P56645 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.38■□□□□ 0.85
PER3P56645 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PER3P56645 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PER3P56645 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PER3P56645 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.37■□□□□ 0.85
PER3P56645 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.37■□□□□ 0.85
PER3P56645 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.37■□□□□ 0.85
PER3P56645 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PER3P56645 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PER3P56645 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.37■□□□□ 0.85
PER3P56645 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PER3P56645 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PER3P56645 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PER3P56645 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.36■□□□□ 0.85
PER3P56645 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PER3P56645 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PER3P56645 AL024507.2-201ENST00000606070 2574 ntBASIC20.36■□□□□ 0.85
PER3P56645 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PER3P56645 BX842568.3-201ENST00000418104 571 ntBASIC20.36■□□□□ 0.85
PER3P56645 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.36■□□□□ 0.85
PER3P56645 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PER3P56645 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.36■□□□□ 0.85
PER3P56645 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.36■□□□□ 0.85
PER3P56645 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PER3P56645 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PER3P56645 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.36■□□□□ 0.85
PER3P56645 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PER3P56645 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PER3P56645 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PER3P56645 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PER3P56645 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.35■□□□□ 0.85
PER3P56645 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PER3P56645 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.35■□□□□ 0.85
PER3P56645 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PER3P56645 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PER3P56645 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PER3P56645 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.34■□□□□ 0.85
PER3P56645 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.34■□□□□ 0.85
PER3P56645 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.34■□□□□ 0.85
PER3P56645 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 SLC47A1P1-202ENST00000449666 945 ntBASIC20.34■□□□□ 0.85
PER3P56645 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.34■□□□□ 0.85
PER3P56645 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.34■□□□□ 0.85
PER3P56645 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.34■□□□□ 0.85
PER3P56645 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 AC022517.1-201ENST00000592429 346 ntBASIC20.34■□□□□ 0.85
PER3P56645 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.34■□□□□ 0.85
PER3P56645 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PER3P56645 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PER3P56645 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PER3P56645 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.33■□□□□ 0.85
PER3P56645 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PER3P56645 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PER3P56645 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PER3P56645 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PER3P56645 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.33■□□□□ 0.85
PER3P56645 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.33■□□□□ 0.85
PER3P56645 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PER3P56645 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PER3P56645 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PER3P56645 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PER3P56645 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PER3P56645 HLA-L-211ENST00000482052 1765 ntBASIC20.32■□□□□ 0.84
PER3P56645 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.32■□□□□ 0.84
PER3P56645 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms