Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC25A1P53007 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC25A1P53007 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SLC25A1P53007 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC25A1P53007 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC25A1P53007 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.78■□□□□ 0.76
SLC25A1P53007 AC137767.1-201ENST00000602918 1920 ntBASIC19.78■□□□□ 0.76
SLC25A1P53007 CLDN5-201ENST00000403084 2357 ntBASIC19.78■□□□□ 0.76
SLC25A1P53007 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC25A1P53007 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC25A1P53007 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SLC25A1P53007 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC25A1P53007 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC25A1P53007 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC25A1P53007 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC25A1P53007 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC25A1P53007 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC25A1P53007 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC25A1P53007 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SLC25A1P53007 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.77■□□□□ 0.75
SLC25A1P53007 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC25A1P53007 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
SLC25A1P53007 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC25A1P53007 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC25A1P53007 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC25A1P53007 AC139530.1-201ENST00000575312 1977 ntBASIC19.76■□□□□ 0.75
SLC25A1P53007 BX664725.1-201ENST00000438252 379 ntBASIC19.76■□□□□ 0.75
SLC25A1P53007 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC25A1P53007 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC25A1P53007 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC25A1P53007 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC25A1P53007 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SLC25A1P53007 AC087742.1-201ENST00000575880 1738 ntBASIC19.76■□□□□ 0.75
SLC25A1P53007 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC25A1P53007 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SLC25A1P53007 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC25A1P53007 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SLC25A1P53007 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC25A1P53007 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SLC25A1P53007 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC25A1P53007 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC25A1P53007 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC25A1P53007 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SLC25A1P53007 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC25A1P53007 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC25A1P53007 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC25A1P53007 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC25A1P53007 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC25A1P53007 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC25A1P53007 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC25A1P53007 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC25A1P53007 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC25A1P53007 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC25A1P53007 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC25A1P53007 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SLC25A1P53007 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC25A1P53007 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC25A1P53007 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC25A1P53007 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC25A1P53007 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SLC25A1P53007 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC25A1P53007 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC25A1P53007 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC25A1P53007 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC25A1P53007 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC25A1P53007 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SLC25A1P53007 AC092053.2-201ENST00000640557 1818 ntBASIC19.73■□□□□ 0.75
SLC25A1P53007 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC25A1P53007 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC25A1P53007 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC25A1P53007 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC25A1P53007 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC25A1P53007 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC25A1P53007 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC25A1P53007 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC25A1P53007 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC25A1P53007 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC25A1P53007 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC25A1P53007 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC25A1P53007 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms