Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
POLR2JP52435 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
POLR2JP52435 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR2JP52435 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 AC092053.2-201ENST00000640557 1818 ntBASIC21.26■□□□□ 0.99
POLR2JP52435 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR2JP52435 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 AC010980.1-201ENST00000587192 1142 ntBASIC21.25■□□□□ 0.99
POLR2JP52435 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
POLR2JP52435 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR2JP52435 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
POLR2JP52435 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR2JP52435 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
POLR2JP52435 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
POLR2JP52435 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
POLR2JP52435 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR2JP52435 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.24■□□□□ 0.99
POLR2JP52435 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR2JP52435 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.24■□□□□ 0.99
POLR2JP52435 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
POLR2JP52435 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
POLR2JP52435 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR2JP52435 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2JP52435 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
POLR2JP52435 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2JP52435 AC144652.1-201ENST00000609974 1624 ntBASIC21.23■□□□□ 0.99
POLR2JP52435 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2JP52435 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR2JP52435 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR2JP52435 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR2JP52435 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2JP52435 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
POLR2JP52435 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR2JP52435 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
POLR2JP52435 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2JP52435 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.23■□□□□ 0.99
POLR2JP52435 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR2JP52435 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
POLR2JP52435 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
POLR2JP52435 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
POLR2JP52435 C11orf96-202ENST00000528572 1834 ntBASIC21.22■□□□□ 0.99
POLR2JP52435 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
POLR2JP52435 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
POLR2JP52435 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 AC007375.3-201ENST00000600936 2314 ntBASIC21.22■□□□□ 0.99
POLR2JP52435 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
POLR2JP52435 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.22■□□□□ 0.99
POLR2JP52435 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.22■□□□□ 0.99
POLR2JP52435 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.22■□□□□ 0.99
POLR2JP52435 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
POLR2JP52435 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
POLR2JP52435 AC080038.3-201ENST00000623346 1952 ntBASIC21.21■□□□□ 0.99
POLR2JP52435 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR2JP52435 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2JP52435 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
POLR2JP52435 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2JP52435 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2JP52435 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.21■□□□□ 0.99
POLR2JP52435 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.21■□□□□ 0.99
POLR2JP52435 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
POLR2JP52435 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.99
POLR2JP52435 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.2■□□□□ 0.99
POLR2JP52435 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.2■□□□□ 0.98
POLR2JP52435 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 AC087742.1-201ENST00000575880 1738 ntBASIC21.2■□□□□ 0.98
POLR2JP52435 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
POLR2JP52435 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.2■□□□□ 0.98
POLR2JP52435 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2JP52435 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
POLR2JP52435 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2JP52435 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.19■□□□□ 0.98
POLR2JP52435 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
POLR2JP52435 SNX5-217ENST00000606557 1087 ntBASIC21.19■□□□□ 0.98
POLR2JP52435 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2JP52435 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2JP52435 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
POLR2JP52435 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
POLR2JP52435 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms