Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF144AP50876 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF144AP50876 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF144AP50876 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF144AP50876 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF144AP50876 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF144AP50876 AL356441.2-201ENST00000443009 864 ntBASIC20.59■□□□□ 0.89
RNF144AP50876 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF144AP50876 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF144AP50876 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF144AP50876 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF144AP50876 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF144AP50876 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF144AP50876 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF144AP50876 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF144AP50876 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF144AP50876 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF144AP50876 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF144AP50876 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF144AP50876 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF144AP50876 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
RNF144AP50876 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF144AP50876 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF144AP50876 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RNF144AP50876 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF144AP50876 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF144AP50876 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF144AP50876 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF144AP50876 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF144AP50876 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.56■□□□□ 0.88
RNF144AP50876 AL117328.2-201ENST00000624617 1940 ntBASIC20.56■□□□□ 0.88
RNF144AP50876 AC144652.1-201ENST00000609974 1624 ntBASIC20.56■□□□□ 0.88
RNF144AP50876 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF144AP50876 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF144AP50876 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF144AP50876 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF144AP50876 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF144AP50876 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF144AP50876 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF144AP50876 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RNF144AP50876 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF144AP50876 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF144AP50876 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
RNF144AP50876 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF144AP50876 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF144AP50876 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF144AP50876 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF144AP50876 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF144AP50876 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF144AP50876 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF144AP50876 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF144AP50876 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF144AP50876 AL117332.1-201ENST00000622628 974 ntBASIC20.54■□□□□ 0.88
RNF144AP50876 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF144AP50876 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF144AP50876 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF144AP50876 CLDN5-201ENST00000403084 2357 ntBASIC20.53■□□□□ 0.88
RNF144AP50876 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF144AP50876 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF144AP50876 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF144AP50876 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF144AP50876 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.53■□□□□ 0.88
RNF144AP50876 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF144AP50876 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF144AP50876 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF144AP50876 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF144AP50876 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF144AP50876 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
RNF144AP50876 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF144AP50876 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF144AP50876 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
RNF144AP50876 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF144AP50876 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF144AP50876 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF144AP50876 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF144AP50876 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RNF144AP50876 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF144AP50876 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF144AP50876 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
RNF144AP50876 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.51■□□□□ 0.87
RNF144AP50876 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF144AP50876 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.51■□□□□ 0.87
RNF144AP50876 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF144AP50876 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms