Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRP9P49458 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRP9P49458 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SRP9P49458 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRP9P49458 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.6■□□□□ 0.73
SRP9P49458 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.6■□□□□ 0.73
SRP9P49458 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.6■□□□□ 0.73
SRP9P49458 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRP9P49458 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.6■□□□□ 0.73
SRP9P49458 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.6■□□□□ 0.73
SRP9P49458 MIR4787-201ENST00000607364 84 ntBASIC19.6■□□□□ 0.73
SRP9P49458 AL022069.1-201ENST00000568025 1636 ntBASIC19.6■□□□□ 0.73
SRP9P49458 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRP9P49458 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.6■□□□□ 0.73
SRP9P49458 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRP9P49458 AL161729.1-201ENST00000604104 1402 ntBASIC19.59■□□□□ 0.73
SRP9P49458 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.59■□□□□ 0.73
SRP9P49458 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SRP9P49458 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
SRP9P49458 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.59■□□□□ 0.73
SRP9P49458 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.59■□□□□ 0.73
SRP9P49458 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRP9P49458 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.58■□□□□ 0.73
SRP9P49458 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRP9P49458 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRP9P49458 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRP9P49458 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRP9P49458 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.58■□□□□ 0.72
SRP9P49458 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP9P49458 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP9P49458 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP9P49458 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP9P49458 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRP9P49458 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRP9P49458 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SRP9P49458 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP9P49458 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRP9P49458 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.57■□□□□ 0.72
SRP9P49458 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP9P49458 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP9P49458 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.57■□□□□ 0.72
SRP9P49458 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP9P49458 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRP9P49458 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP9P49458 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.56■□□□□ 0.72
SRP9P49458 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP9P49458 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.56■□□□□ 0.72
SRP9P49458 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP9P49458 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP9P49458 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRP9P49458 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.55■□□□□ 0.72
SRP9P49458 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SRP9P49458 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.55■□□□□ 0.72
SRP9P49458 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.55■□□□□ 0.72
SRP9P49458 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.55■□□□□ 0.72
SRP9P49458 AC092028.1-203ENST00000608262 953 ntBASIC19.55■□□□□ 0.72
SRP9P49458 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.55■□□□□ 0.72
SRP9P49458 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SRP9P49458 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRP9P49458 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SRP9P49458 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.54■□□□□ 0.72
SRP9P49458 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.54■□□□□ 0.72
SRP9P49458 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SRP9P49458 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
SRP9P49458 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.54■□□□□ 0.72
SRP9P49458 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.54■□□□□ 0.72
SRP9P49458 PKD1P6-201ENST00000343738 4769 ntBASIC19.53■□□□□ 0.72
SRP9P49458 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
SRP9P49458 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.53■□□□□ 0.72
SRP9P49458 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.53■□□□□ 0.72
SRP9P49458 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SRP9P49458 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.53■□□□□ 0.72
SRP9P49458 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.53■□□□□ 0.72
SRP9P49458 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SRP9P49458 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.53■□□□□ 0.72
SRP9P49458 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.53■□□□□ 0.72
SRP9P49458 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SRP9P49458 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms