Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A12P48065 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.52■■□□□ 1.04
SLC6A12P48065 AC009086.3-201ENST00000623486 1008 ntBASIC21.52■■□□□ 1.04
SLC6A12P48065 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.52■■□□□ 1.04
SLC6A12P48065 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A12P48065 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SLC6A12P48065 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A12P48065 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC6A12P48065 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.52■■□□□ 1.03
SLC6A12P48065 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC6A12P48065 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A12P48065 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.51■■□□□ 1.03
SLC6A12P48065 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A12P48065 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A12P48065 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC6A12P48065 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A12P48065 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A12P48065 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A12P48065 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC6A12P48065 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC6A12P48065 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
SLC6A12P48065 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC6A12P48065 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
SLC6A12P48065 ESRRAP2-201ENST00000418437 1549 ntBASIC21.5■■□□□ 1.03
SLC6A12P48065 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A12P48065 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC6A12P48065 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLC6A12P48065 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A12P48065 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A12P48065 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A12P48065 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
SLC6A12P48065 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC6A12P48065 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC6A12P48065 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A12P48065 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A12P48065 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SLC6A12P48065 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC6A12P48065 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SLC6A12P48065 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A12P48065 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC6A12P48065 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.48■■□□□ 1.03
SLC6A12P48065 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.48■■□□□ 1.03
SLC6A12P48065 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.48■■□□□ 1.03
SLC6A12P48065 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.48■■□□□ 1.03
SLC6A12P48065 AL512631.2-201ENST00000604634 923 ntBASIC21.48■■□□□ 1.03
SLC6A12P48065 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SLC6A12P48065 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SLC6A12P48065 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.47■■□□□ 1.03
SLC6A12P48065 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC6A12P48065 AL499627.2-201ENST00000606283 725 ntBASIC21.47■■□□□ 1.03
SLC6A12P48065 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.47■■□□□ 1.03
SLC6A12P48065 AL117328.2-201ENST00000624617 1940 ntBASIC21.47■■□□□ 1.03
SLC6A12P48065 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SLC6A12P48065 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.46■■□□□ 1.03
SLC6A12P48065 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.46■■□□□ 1.03
SLC6A12P48065 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 AC241377.3-202ENST00000626088 1088 ntBASIC21.46■■□□□ 1.03
SLC6A12P48065 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC6A12P48065 AC241585.3-202ENST00000628937 1088 ntBASIC21.46■■□□□ 1.03
SLC6A12P48065 AC245100.8-202ENST00000629247 1058 ntBASIC21.46■■□□□ 1.03
SLC6A12P48065 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.46■■□□□ 1.03
SLC6A12P48065 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SLC6A12P48065 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SLC6A12P48065 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SLC6A12P48065 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
SLC6A12P48065 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
SLC6A12P48065 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SLC6A12P48065 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SLC6A12P48065 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms