Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RABIFP47224 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.93■■□□□ 1.1
RABIFP47224 YBX1P1-201ENST00000445822 960 ntBASIC21.93■■□□□ 1.1
RABIFP47224 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RABIFP47224 AL162430.1-201ENST00000480705 870 ntBASIC21.93■■□□□ 1.1
RABIFP47224 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RABIFP47224 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.92■■□□□ 1.1
RABIFP47224 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.92■■□□□ 1.1
RABIFP47224 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.92■■□□□ 1.1
RABIFP47224 AL354811.1-201ENST00000610286 706 ntBASIC21.92■■□□□ 1.1
RABIFP47224 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.92■■□□□ 1.1
RABIFP47224 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RABIFP47224 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RABIFP47224 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RABIFP47224 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RABIFP47224 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RABIFP47224 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.9■■□□□ 1.1
RABIFP47224 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RABIFP47224 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RABIFP47224 AC079630.1-202ENST00000618127 1840 ntBASIC21.9■■□□□ 1.1
RABIFP47224 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RABIFP47224 AC027612.3-201ENST00000413684 1047 ntBASIC21.9■■□□□ 1.1
RABIFP47224 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RABIFP47224 AC012414.1-201ENST00000556676 535 ntBASIC21.9■■□□□ 1.1
RABIFP47224 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.9■■□□□ 1.1
RABIFP47224 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
RABIFP47224 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RABIFP47224 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RABIFP47224 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.89■■□□□ 1.09
RABIFP47224 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RABIFP47224 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.89■■□□□ 1.09
RABIFP47224 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.89■■□□□ 1.09
RABIFP47224 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.89■■□□□ 1.09
RABIFP47224 AC034268.1-201ENST00000441047 882 ntBASIC21.89■■□□□ 1.09
RABIFP47224 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RABIFP47224 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RABIFP47224 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RABIFP47224 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RABIFP47224 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.88■■□□□ 1.09
RABIFP47224 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RABIFP47224 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.88■■□□□ 1.09
RABIFP47224 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RABIFP47224 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RABIFP47224 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RABIFP47224 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RABIFP47224 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
RABIFP47224 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.88■■□□□ 1.09
RABIFP47224 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.88■■□□□ 1.09
RABIFP47224 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RABIFP47224 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RABIFP47224 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RABIFP47224 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RABIFP47224 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.87■■□□□ 1.09
RABIFP47224 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RABIFP47224 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RABIFP47224 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.87■■□□□ 1.09
RABIFP47224 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.87■■□□□ 1.09
RABIFP47224 AC123595.1-201ENST00000440769 1046 ntBASIC21.87■■□□□ 1.09
RABIFP47224 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.87■■□□□ 1.09
RABIFP47224 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RABIFP47224 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.86■■□□□ 1.09
RABIFP47224 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.86■■□□□ 1.09
RABIFP47224 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.86■■□□□ 1.09
RABIFP47224 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RABIFP47224 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RABIFP47224 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.85■■□□□ 1.09
RABIFP47224 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RABIFP47224 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RABIFP47224 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RABIFP47224 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RABIFP47224 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RABIFP47224 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.85■■□□□ 1.09
RABIFP47224 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.85■■□□□ 1.09
RABIFP47224 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RABIFP47224 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RABIFP47224 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RABIFP47224 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RABIFP47224 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.84■■□□□ 1.09
RABIFP47224 ABCB10P4-201ENST00000566803 2184 ntBASIC21.84■■□□□ 1.09
RABIFP47224 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.84■■□□□ 1.09
RABIFP47224 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.84■■□□□ 1.09
RABIFP47224 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.84■■□□□ 1.09
RABIFP47224 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.84■■□□□ 1.09
RABIFP47224 MIR6084-201ENST00000622012 110 ntBASIC21.84■■□□□ 1.09
RABIFP47224 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.84■■□□□ 1.09
RABIFP47224 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms