Protein–RNA interactions for Protein: P47153

TDA4, Topoisomerase I damage affected protein 4, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA4P47153 IDS2YJL146W 1410 nt3.35□□□□□ -1.87
TDA4P47153 CDC9YDL164C 2268 nt3.35□□□□□ -1.87
TDA4P47153 MDL1YLR188W 2088 nt3.34□□□□□ -1.87
TDA4P47153 FRA2YGL220W 363 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)CtQ(UUG)C 72 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)D1tQ(UUG)D1 72 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)D2tQ(UUG)D2 72 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)D3tQ(UUG)D3 72 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)E1tQ(UUG)E1 72 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)HtQ(UUG)H 72 nt3.34□□□□□ -1.87
TDA4P47153 tQ(UUG)LtQ(UUG)L 72 nt3.34□□□□□ -1.87
TDA4P47153 YAE1YJR067C 426 nt3.34□□□□□ -1.87
TDA4P47153 YLR364C-AYLR364C-A 123 nt3.34□□□□□ -1.87
TDA4P47153 INA17YPL099C 549 nt3.34□□□□□ -1.87
TDA4P47153 snR37snR37 386 nt3.34□□□□□ -1.87
TDA4P47153 CEG1YGL130W 1380 nt3.34□□□□□ -1.88
TDA4P47153 RPB2YOR151C 3675 nt3.34□□□□□ -1.88
TDA4P47153 FAA1YOR317W 2103 nt3.34□□□□□ -1.88
TDA4P47153 HST1YOL068C 1512 nt3.34□□□□□ -1.88
TDA4P47153 PIM1YBL022C 3402 nt3.34□□□□□ -1.88
TDA4P47153 BCK2YER167W 2556 nt3.33□□□□□ -1.88
TDA4P47153 SRP72YPL210C 1923 nt3.33□□□□□ -1.88
TDA4P47153 YGL088WYGL088W 366 nt3.33□□□□□ -1.88
TDA4P47153 RFC2YJR068W 1062 nt3.33□□□□□ -1.88
TDA4P47153 RPL14AYKL006W 417 nt3.33□□□□□ -1.88
TDA4P47153 SRP40YKR092C 1221 nt3.33□□□□□ -1.88
TDA4P47153 NMD4YLR363C 657 nt3.33□□□□□ -1.88
TDA4P47153 OAZ1YPL052W 879 nt3.33□□□□□ -1.88
TDA4P47153 CHD1YER164W 4407 nt3.33□□□□□ -1.88
TDA4P47153 LAS1YKR063C 1509 nt3.33□□□□□ -1.88
TDA4P47153 STV1YMR054W 2673 nt3.32□□□□□ -1.88
TDA4P47153 MNN4YKL201C 3537 nt3.32□□□□□ -1.88
TDA4P47153 SPI1YER150W 447 nt3.32□□□□□ -1.88
TDA4P47153 YGR291CYGR291C 222 nt3.32□□□□□ -1.88
TDA4P47153 YNK1YKL067W 462 nt3.32□□□□□ -1.88
TDA4P47153 TAF11YML015C 1041 nt3.32□□□□□ -1.88
TDA4P47153 SHE1YBL031W 1017 nt3.32□□□□□ -1.88
TDA4P47153 RRN9YMR270C 1098 nt3.32□□□□□ -1.88
TDA4P47153 SUI1YNL244C 327 nt3.32□□□□□ -1.88
TDA4P47153 FSH3YOR280C 801 nt3.32□□□□□ -1.88
TDA4P47153 YBR298C-AYBR298C-A 222 nt3.32□□□□□ -1.88
TDA4P47153 MST1YKL194C 1389 nt3.32□□□□□ -1.88
TDA4P47153 YIL001WYIL001W 1542 nt3.32□□□□□ -1.88
TDA4P47153 RPO21YDL140C 5202 nt3.31□□□□□ -1.88
TDA4P47153 ALR2YFL050C 2577 nt3.31□□□□□ -1.88
TDA4P47153 OCA4YCR095C 1089 nt3.31□□□□□ -1.88
TDA4P47153 YGL132WYGL132W 336 nt3.31□□□□□ -1.88
TDA4P47153 YGL188CYGL188C 174 nt3.31□□□□□ -1.88
TDA4P47153 LSB1YGR136W 726 nt3.31□□□□□ -1.88
TDA4P47153 ISY1YJR050W 708 nt3.31□□□□□ -1.88
TDA4P47153 ACP1YKL192C 378 nt3.31□□□□□ -1.88
TDA4P47153 SIW14YNL032W 846 nt3.31□□□□□ -1.88
TDA4P47153 YPL073CYPL073C 486 nt3.31□□□□□ -1.88
TDA4P47153 YPL278CYPL278C 303 nt3.31□□□□□ -1.88
TDA4P47153 NAT3YPR131C 588 nt3.31□□□□□ -1.88
TDA4P47153 EFM2YBR271W 1260 nt3.31□□□□□ -1.88
TDA4P47153 SYF1YDR416W 2580 nt3.31□□□□□ -1.88
TDA4P47153 MNL1YHR204W 2391 nt3.31□□□□□ -1.88
TDA4P47153 JHD2YJR119C 2187 nt3.31□□□□□ -1.88
TDA4P47153 YDR444WYDR444W 2064 nt3.31□□□□□ -1.88
TDA4P47153 UGA3YDL170W 1587 nt3.3□□□□□ -1.88
TDA4P47153 RXT3YDL076C 885 nt3.3□□□□□ -1.88
TDA4P47153 YER085CYER085C 522 nt3.3□□□□□ -1.88
TDA4P47153 MRP4YHL004W 1185 nt3.3□□□□□ -1.88
TDA4P47153 CNB1YKL190W 528 nt3.3□□□□□ -1.88
TDA4P47153 SEC72YLR292C 582 nt3.3□□□□□ -1.88
TDA4P47153 NKP2YLR315W 462 nt3.3□□□□□ -1.88
TDA4P47153 PEP4YPL154C 1218 nt3.3□□□□□ -1.88
TDA4P47153 NAM2YLR382C 2685 nt3.3□□□□□ -1.88
TDA4P47153 GCR1YPL075W 2358 nt3.3□□□□□ -1.88
TDA4P47153 HMG1YML075C 3165 nt3.29□□□□□ -1.88
TDA4P47153 TRK1YJL129C 3708 nt3.29□□□□□ -1.88
TDA4P47153 YCR050CYCR050C 309 nt3.29□□□□□ -1.88
TDA4P47153 RPS13YDR064W 456 nt3.29□□□□□ -1.88
TDA4P47153 RTA1YGR213C 954 nt3.29□□□□□ -1.88
TDA4P47153 GVP36YIL041W 981 nt3.29□□□□□ -1.88
TDA4P47153 ADD66YKL206C 804 nt3.29□□□□□ -1.88
TDA4P47153 OCA1YNL099C 717 nt3.29□□□□□ -1.88
TDA4P47153 YPL014WYPL014W 1146 nt3.29□□□□□ -1.88
TDA4P47153 YBR134WYBR134W 402 nt3.29□□□□□ -1.88
TDA4P47153 BCH2YKR027W 2298 nt3.29□□□□□ -1.88
TDA4P47153 BOI2YER114C 3123 nt3.28□□□□□ -1.88
TDA4P47153 GRS2YPR081C 1857 nt3.28□□□□□ -1.88
TDA4P47153 TAF7YMR227C 1773 nt3.28□□□□□ -1.88
TDA4P47153 MRPL7YDR237W 879 nt3.28□□□□□ -1.88
TDA4P47153 HIS6YIL020C 786 nt3.28□□□□□ -1.88
TDA4P47153 RDN5-1RDN5-1 121 nt3.28□□□□□ -1.88
TDA4P47153 FMP46YKR049C 402 nt3.28□□□□□ -1.88
TDA4P47153 RDN5-6RDN5-6 121 nt3.28□□□□□ -1.88
TDA4P47153 YLR407WYLR407W 687 nt3.28□□□□□ -1.88
TDA4P47153 FRM2YCL026C-A 582 nt3.28□□□□□ -1.88
TDA4P47153 MMT1YMR177W 1533 nt3.28□□□□□ -1.88
TDA4P47153 LYP1YNL268W 1836 nt3.28□□□□□ -1.88
TDA4P47153 MLH2YLR035C 2088 nt3.28□□□□□ -1.89
TDA4P47153 PTR3YFR029W 2037 nt3.27□□□□□ -1.89
TDA4P47153 YMR111CYMR111C 1389 nt3.27□□□□□ -1.89
TDA4P47153 NBP2YDR162C 711 nt3.27□□□□□ -1.89
TDA4P47153 YFR045WYFR045W 930 nt3.27□□□□□ -1.89
TDA4P47153 VMA22YHR060W 546 nt3.27□□□□□ -1.89
TDA4P47153 YAR023CYAR023C 540 nt3.27□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms