Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
GDNFP39905 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
GDNFP39905 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
GDNFP39905 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 AC010980.1-201ENST00000587192 1142 ntBASIC19.28■□□□□ 0.68
GDNFP39905 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.28■□□□□ 0.68
GDNFP39905 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
GDNFP39905 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
GDNFP39905 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
GDNFP39905 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GDNFP39905 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GDNFP39905 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GDNFP39905 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.27■□□□□ 0.68
GDNFP39905 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.27■□□□□ 0.68
GDNFP39905 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.27■□□□□ 0.68
GDNFP39905 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDNFP39905 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDNFP39905 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDNFP39905 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDNFP39905 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GDNFP39905 AC092053.2-201ENST00000640557 1818 ntBASIC19.27■□□□□ 0.68
GDNFP39905 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GDNFP39905 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GDNFP39905 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GDNFP39905 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GDNFP39905 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GDNFP39905 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GDNFP39905 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.26■□□□□ 0.67
GDNFP39905 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GDNFP39905 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
GDNFP39905 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.26■□□□□ 0.67
GDNFP39905 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GDNFP39905 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GDNFP39905 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
GDNFP39905 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 AC139530.1-201ENST00000575312 1977 ntBASIC19.25■□□□□ 0.67
GDNFP39905 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.25■□□□□ 0.67
GDNFP39905 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GDNFP39905 AL592295.1-201ENST00000400984 884 ntBASIC19.25■□□□□ 0.67
GDNFP39905 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
GDNFP39905 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GDNFP39905 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.25■□□□□ 0.67
GDNFP39905 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GDNFP39905 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDNFP39905 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GDNFP39905 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
GDNFP39905 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GDNFP39905 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDNFP39905 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.24■□□□□ 0.67
GDNFP39905 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
GDNFP39905 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GDNFP39905 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDNFP39905 FBXW4P1-201ENST00000426721 2239 ntBASIC19.24■□□□□ 0.67
GDNFP39905 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GDNFP39905 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GDNFP39905 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.23■□□□□ 0.67
GDNFP39905 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.23■□□□□ 0.67
GDNFP39905 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GDNFP39905 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GDNFP39905 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GDNFP39905 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
GDNFP39905 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
GDNFP39905 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GDNFP39905 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.22■□□□□ 0.67
GDNFP39905 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms