Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 VPS28YPL065W 729 nt3.49□□□□□ -1.85
RPB9P27999 YPK3YBR028C 1578 nt3.49□□□□□ -1.85
RPB9P27999 YDR261C-DYDR261C-D 4815 nt3.49□□□□□ -1.85
RPB9P27999 STB2YMR053C 2553 nt3.49□□□□□ -1.85
RPB9P27999 PAF1YBR279W 1338 nt3.48□□□□□ -1.85
RPB9P27999 AIM7YDR063W 450 nt3.48□□□□□ -1.85
RPB9P27999 SPR28YDR218C 1272 nt3.48□□□□□ -1.85
RPB9P27999 HNT2YDR305C 654 nt3.48□□□□□ -1.85
RPB9P27999 YGL101WYGL101W 648 nt3.48□□□□□ -1.85
RPB9P27999 YKL071WYKL071W 771 nt3.48□□□□□ -1.85
RPB9P27999 ADD66YKL206C 804 nt3.48□□□□□ -1.85
RPB9P27999 REX3YLR107W 1215 nt3.48□□□□□ -1.85
RPB9P27999 VPS71YML041C 843 nt3.48□□□□□ -1.85
RPB9P27999 MRP21YBL090W 534 nt3.48□□□□□ -1.85
RPB9P27999 SSB1YDL229W 1842 nt3.48□□□□□ -1.85
RPB9P27999 YPL260WYPL260W 1656 nt3.48□□□□□ -1.85
RPB9P27999 YMR221CYMR221C 1515 nt3.48□□□□□ -1.85
RPB9P27999 MCM2YBL023C 2607 nt3.48□□□□□ -1.85
RPB9P27999 SSA2YLL024C 1920 nt3.48□□□□□ -1.85
RPB9P27999 POL12YBL035C 2118 nt3.47□□□□□ -1.85
RPB9P27999 DAS2YDR020C 699 nt3.47□□□□□ -1.85
RPB9P27999 MCM21YDR318W 1107 nt3.47□□□□□ -1.85
RPB9P27999 SNL1YIL016W 480 nt3.47□□□□□ -1.85
RPB9P27999 TEF4YKL081W 1239 nt3.47□□□□□ -1.85
RPB9P27999 NKP2YLR315W 462 nt3.47□□□□□ -1.85
RPB9P27999 YML031C-AYML031C-A 336 nt3.47□□□□□ -1.85
RPB9P27999 YMR114CYMR114C 1107 nt3.47□□□□□ -1.85
RPB9P27999 VPS68YOL129W 555 nt3.47□□□□□ -1.85
RPB9P27999 YPR059CYPR059C 387 nt3.47□□□□□ -1.85
RPB9P27999 NNK1YKL171W 2787 nt3.47□□□□□ -1.85
RPB9P27999 IZH3YLR023C 1632 nt3.47□□□□□ -1.85
RPB9P27999 SKM1YOL113W 1968 nt3.47□□□□□ -1.85
RPB9P27999 MET17YLR303W 1335 nt3.46□□□□□ -1.85
RPB9P27999 RNY1YPL123C 1305 nt3.46□□□□□ -1.85
RPB9P27999 CDC9YDL164C 2268 nt3.46□□□□□ -1.85
RPB9P27999 PEX29YDR479C 1665 nt3.46□□□□□ -1.85
RPB9P27999 BUD30YDL151C 582 nt3.46□□□□□ -1.86
RPB9P27999 YHP1YDR451C 1062 nt3.46□□□□□ -1.86
RPB9P27999 BUD16YEL029C 939 nt3.46□□□□□ -1.86
RPB9P27999 YGR079WYGR079W 1113 nt3.46□□□□□ -1.86
RPB9P27999 MIC26YGR235C 702 nt3.46□□□□□ -1.86
RPB9P27999 IMP2YMR035W 534 nt3.46□□□□□ -1.86
RPB9P27999 MPD1YOR288C 957 nt3.46□□□□□ -1.86
RPB9P27999 YBR134WYBR134W 402 nt3.46□□□□□ -1.86
RPB9P27999 MNN1YER001W 2289 nt3.46□□□□□ -1.86
RPB9P27999 RPO21YDL140C 5202 nt3.46□□□□□ -1.86
RPB9P27999 ORC6YHR118C 1308 nt3.45□□□□□ -1.86
RPB9P27999 GAS4YOL132W 1416 nt3.45□□□□□ -1.86
RPB9P27999 AVT1YJR001W 1809 nt3.45□□□□□ -1.86
RPB9P27999 STR2YJR130C 1920 nt3.45□□□□□ -1.86
RPB9P27999 IKS1YJL057C 2004 nt3.45□□□□□ -1.86
RPB9P27999 RNA15YGL044C 891 nt3.45□□□□□ -1.86
RPB9P27999 SPO16YHR153C 597 nt3.45□□□□□ -1.86
RPB9P27999 YJR096WYJR096W 849 nt3.45□□□□□ -1.86
RPB9P27999 YNL234WYNL234W 1281 nt3.45□□□□□ -1.86
RPB9P27999 CDC28YBR160W 897 nt3.45□□□□□ -1.86
RPB9P27999 ALG9YNL219C 1668 nt3.45□□□□□ -1.86
RPB9P27999 MNN4YKL201C 3537 nt3.45□□□□□ -1.86
RPB9P27999 JHD2YJR119C 2187 nt3.45□□□□□ -1.86
RPB9P27999 STE7YDL159W 1548 nt3.44□□□□□ -1.86
RPB9P27999 NTA1YJR062C 1374 nt3.44□□□□□ -1.86
RPB9P27999 CPR1YDR155C 489 nt3.44□□□□□ -1.86
RPB9P27999 YFL041W-AYFL041W-A 192 nt3.44□□□□□ -1.86
RPB9P27999 CYC1YJR048W 330 nt3.44□□□□□ -1.86
RPB9P27999 YAL047W-AYAL047W-A 330 nt3.44□□□□□ -1.86
RPB9P27999 SPC3YLR066W 555 nt3.44□□□□□ -1.86
RPB9P27999 UPS2YLR168C 693 nt3.44□□□□□ -1.86
RPB9P27999 EMG1YLR186W 759 nt3.44□□□□□ -1.86
RPB9P27999 YMR315WYMR315W 1050 nt3.44□□□□□ -1.86
RPB9P27999 COP1YDL145C 3606 nt3.44□□□□□ -1.86
RPB9P27999 YCR023CYCR023C 1836 nt3.44□□□□□ -1.86
RPB9P27999 IME4YGL192W 1803 nt3.44□□□□□ -1.86
RPB9P27999 SBE2YDR351W 2595 nt3.44□□□□□ -1.86
RPB9P27999 TRM13YOL125W 1431 nt3.44□□□□□ -1.86
RPB9P27999 CDC15YAR019C 2925 nt3.43□□□□□ -1.86
RPB9P27999 YMR1YJR110W 2067 nt3.43□□□□□ -1.86
RPB9P27999 GRC3YLL035W 1899 nt3.43□□□□□ -1.86
RPB9P27999 MDM30YLR368W 1797 nt3.43□□□□□ -1.86
RPB9P27999 PUS9YDL036C 1389 nt3.43□□□□□ -1.86
RPB9P27999 FLC1YPL221W 2382 nt3.43□□□□□ -1.86
RPB9P27999 RPB7YDR404C 516 nt3.43□□□□□ -1.86
RPB9P27999 YDR545C-AYDR545C-A 480 nt3.43□□□□□ -1.86
RPB9P27999 RIP1YEL024W 648 nt3.43□□□□□ -1.86
RPB9P27999 YEL077W-AYEL077W-A 483 nt3.43□□□□□ -1.86
RPB9P27999 YER190C-BYER190C-B 483 nt3.43□□□□□ -1.86
RPB9P27999 SUP56tL(CAA)A 82 nt3.43□□□□□ -1.86
RPB9P27999 SUP53tL(CAA)C 82 nt3.43□□□□□ -1.86
RPB9P27999 YFL068WYFL068W 483 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)DtL(CAA)D 82 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)G1tL(CAA)G1 82 nt3.43□□□□□ -1.86
RPB9P27999 SUP54tL(CAA)G2 82 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)G3tL(CAA)G3 82 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)KtL(CAA)K 82 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)LtL(CAA)L 82 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)MtL(CAA)M 82 nt3.43□□□□□ -1.86
RPB9P27999 tL(CAA)NtL(CAA)N 82 nt3.43□□□□□ -1.86
RPB9P27999 DUO1YGL061C 744 nt3.43□□□□□ -1.86
RPB9P27999 YGR296C-BYGR296C-B 483 nt3.43□□□□□ -1.86
RPB9P27999 YHL050W-AYHL050W-A 483 nt3.43□□□□□ -1.86
RPB9P27999 YHR219C-AYHR219C-A 483 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms