Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 ALDH1A3-203ENST00000557963 1670 ntBASIC17.78■□□□□ 0.44
ATP6V0CP27449 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.78■□□□□ 0.44
ATP6V0CP27449 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP6V0CP27449 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 FAM99A-202ENST00000538190 1989 ntBASIC17.78■□□□□ 0.44
ATP6V0CP27449 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP6V0CP27449 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP6V0CP27449 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0CP27449 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0CP27449 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0CP27449 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 AC093536.1-201ENST00000569153 554 ntBASIC17.77■□□□□ 0.44
ATP6V0CP27449 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0CP27449 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0CP27449 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0CP27449 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0CP27449 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0CP27449 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0CP27449 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0CP27449 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0CP27449 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP6V0CP27449 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP6V0CP27449 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
ATP6V0CP27449 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ATP6V0CP27449 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 AC060814.1-201ENST00000554326 538 ntBASIC17.76■□□□□ 0.43
ATP6V0CP27449 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0CP27449 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ATP6V0CP27449 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP6V0CP27449 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP6V0CP27449 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.75■□□□□ 0.43
ATP6V0CP27449 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP6V0CP27449 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0CP27449 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATP6V0CP27449 AC005229.4-201ENST00000610085 2198 ntBASIC17.74■□□□□ 0.43
ATP6V0CP27449 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATP6V0CP27449 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0CP27449 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ATP6V0CP27449 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0CP27449 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 CR559946.2-201ENST00000623684 991 ntBASIC17.73■□□□□ 0.43
ATP6V0CP27449 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0CP27449 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0CP27449 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0CP27449 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 AC010542.4-201ENST00000563151 1910 ntBASIC17.72■□□□□ 0.43
ATP6V0CP27449 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP6V0CP27449 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP6V0CP27449 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ATP6V0CP27449 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0CP27449 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms